Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq430 172 1e-37
seq245 129 1e-24
seq768 102 2e-16
>seq430
Length=18842
Score = 172 bits (190), Expect = 1e-37
Identities = 177/229 (77%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| || || || | || ||||||||||||||||| || |
Sbjct 6712 ACCACCACGGAGACGAAGGACGAGGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGA 6771
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| | || || ||||||||||||||||| || ||||| ||
Sbjct 6772 CAGAGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAAACGCTGCTGGTCGGGAGG 6831
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|| |||||||| ||||||||| ||||| || ||| ||||||| ||||| ||| || |
Sbjct 6832 GATGCCCTCCTTATCTTGGATC-TTGCTCTTCACGTTATCGATGGTGTCTGAACTCTCCA 6890
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || |||||||| || || || | |||||| ||||| || |||||
Sbjct 6891 CCTCCAGCGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 6939
Score = 165 bits (182), Expect = 2e-35
Identities = 175/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || || ||||| || | ||| || || || |||||||||||||| |
Sbjct 6485 CCACCACGGAGTCGGAGGACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAG 6544
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
||||| || || ||||| || || || ||||||||||||| ||| || ||||| ||
Sbjct 6545 AGCGTCCGTCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGACGCTGCTGGTCGGGAGGG 6604
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||| ||||| ||| ||||| || ||| | ||||| |||||||| ||| ||
Sbjct 6605 ATGCCCTCCTTATCTTGAATC-TTGCTCTTGACGTTGTCGATCGTGTCCGAGCTTTCCAC 6663
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||||||||| || || | ||||| ||||| ||||||||
Sbjct 6664 CTCCAACGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6711
Score = 159 bits (176), Expect = 7e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || |||| || | |||| ||| ||||||||||||||||| |
Sbjct 6940 ACCACCACGCAGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGA 6999
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| |||||||| || || || || || ||||||||||| || || ||| ||
Sbjct 7000 GAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCAGGAGG 7059
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| | || || | ||||| ||||| | ||| ||
Sbjct 7060 GATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGCTGGATTCAAC 7119
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
|| || ||||| ||||| || || | ||||| ||||
Sbjct 7120 CTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGA 7157
Score = 122 bits (134), Expect = 2e-22
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || || || || | ||| || || |||||||||||||| |
Sbjct 7235 CCACCGCGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 7294
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| |||||||| || || || || || ||||||| ||| || || ||| ||
Sbjct 7295 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGGGGG 7354
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||| ||||| || ||| | ||||| ||||| | |||||
Sbjct 7355 ATGCCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGAC 7413
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
||||| ||||| ||||| || ||
Sbjct 7414 CTCGAGGGTGATGGTCTTGCCGGT 7437
>seq245
Length=44002
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| || |||||||||||||| || || || || || |||||
Sbjct 4019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3960
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| || ||||| ||||| ||||||||||| |||||||| | || ||| | |||
Sbjct 3959 AGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 3900
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | || || ||||| || || ||||||||||||| ||||| |||||
Sbjct 3899 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 3841
>seq768
Length=20780
Score = 102 bits (112), Expect = 2e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || ||||| || | || || || |||||||||||||| |
Sbjct 8383 ACCACCACGCAGGCGCAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 8442
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| || || || || || ||||||| ||| || ||||| ||
Sbjct 8443 AAGAGTACGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGG 8502
Query 282992 AATACCCTCCTTGTCT 283007
|| ||||||||||||
Sbjct 8503 GATTCCCTCCTTGTCT 8518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046670104745408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |