Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02- 02] 5,152 sequences; 32,841,510 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq430 174 4e-38 seq245 111 4e-19 seq155 98.7 2e-15 >seq430 Length=18842 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || |||||||| |||||||||||||| || |||||||| || |||||| Sbjct 6936 CAAATCTTCGTCAAGACTCTCACCGGAAAAACGATCACGCTGGAGGTGGAGAGTTCAGAC 6877 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| || || || || || |||||||| |||||||| Sbjct 6876 ACCATCGATAACGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCCGACCAGCAG 6817 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| ||||| || ||| | || ||||| | ||||| ||||||| ||| || Sbjct 6816 CGTTTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGCACTCTGTCCGATTACAACATC 6757 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 |||||||| || || || || || || Sbjct 6756 CAAAAAGAGTCTACTCTTCACCTCGT 6731 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || |||||||| | |||||||||||||| ||| Sbjct 6708 CAGATCTTCGTCAAGACCCTCACTGGCAAGACGATCACGTTGGAGGTGGAAAGCTCGGAC 6649 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| || || || || |||||||| |||||||| Sbjct 6648 ACGATCGACAACGTCAAGAGCAAGATTCAAGATAAGGAGGGCATCCCTCCCGACCAGCAG 6589 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| || ||| |||| || | || || ||| || Sbjct 6588 CGTCTGATCTTTGCCGGTAAGCAGCTCGAGGACGGACGGACGCTCTCGGACTACAACATC 6529 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || Sbjct 6528 CAGAAGGAGAGTACGCTGCACCTGGT 6503 Score = 134 bits (148), Expect = 3e-26 Identities = 151/201 (75%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || ||||| ||||| || |||||||| ||||| ||| | |||||||||| Sbjct 7157 TCGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTTGAATCCAGCGACACCATCG 7098 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || || || ||||| |||||||| || || |||||||| || ||||| || | | Sbjct 7097 ACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGTTTGA 7038 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||| || || ||||| || ||||| | || || |||| || ||| ||||||| | Sbjct 7037 TCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAAAAGG 6978 Query 178111 AATCAACACTGCATCTTGTTT 178131 |||| || || || |||| || Sbjct 6977 AATCCACGCTCCA-CTTGGTT 6958 Score = 123 bits (136), Expect = 6e-23 Identities = 142/190 (75%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCA 177999 |||| || || || |||||||||||||| || ||| ||||||||||| ||||||| Sbjct 7439 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC---GACACCATCGACAACGTCA 7383 Query 178000 AACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCG 178059 | ||||| |||||||| || || ||||| || || ||||| || || |||||||| | Sbjct 7382 AGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAGCAGCGTCTGATCTTCGCTG 7323 Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACAC 178119 | || ||||| || ||||| | ||||| |||| || ||| |||| || || || || | Sbjct 7322 GCAAGCAGCTTGAGGATGGTCGCACTCTGTCCGACTACAACATCCAGAAGGAGTCCACCC 7263 Query 178120 TGCATCTTGT 178129 | || || || Sbjct 7262 TTCACCTCGT 7253 >seq245 Length=44002 Score = 111 bits (122), Expect = 4e-19 Identities = 140/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 3840 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 3896 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || || |||||||| || Sbjct 3897 CATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCG 3956 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 ||||||||||| || || ||||| || ||||| | || || ||| || ||| |||| Sbjct 3957 TCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 4016 Query 178106 AAAAGAATCAA 178116 || | || || Sbjct 4017 GAAGGTATGAA 4027 >seq155 Length=53423 Score = 98.7 bits (108), Expect = 2e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 214264 TACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGACCGGGAGCCTCG 214323 |||||||| ||||| | ||||| || ||||| ||||| | || || ||||||||| Sbjct 16670 TACTTTTCGTAAAGGGCATCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCG 16729 Query 214324 TTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATGAAAAGGTCGGAA 214383 ||||||||||| || |||| | || || || || | |||||||| ||||| | | Sbjct 16730 TTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGA 16789 Query 214384 GTCCAGATTGCATAAAAAATCTCTCTGGCTCTCA 214417 ||||||| ||||| |||| || | |||||||| Sbjct 16790 GTCCAGAGAGCATAGAAAAGATCACGGGCTCTCA 16823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203651741703488