Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sclerotiorum_20[genbank_20GCA_5F000530345.1_202014-02-
02] 5,152 sequences; 32,841,510 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq430 174 4e-38
seq245 111 4e-19
seq155 98.7 2e-15
>seq430
Length=18842
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || |||||||| |||||||||||||| || |||||||| || ||||||
Sbjct 6936 CAAATCTTCGTCAAGACTCTCACCGGAAAAACGATCACGCTGGAGGTGGAGAGTTCAGAC 6877
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| || || || || || |||||||| ||||||||
Sbjct 6876 ACCATCGATAACGTGAAGAGCAAGATCCAAGATAAGGAGGGCATCCCTCCCGACCAGCAG 6817
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| ||||| || ||| | || ||||| | ||||| ||||||| ||| ||
Sbjct 6816 CGTTTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGCACTCTGTCCGATTACAACATC 6757
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|||||||| || || || || || ||
Sbjct 6756 CAAAAAGAGTCTACTCTTCACCTCGT 6731
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || |||||||| | |||||||||||||| |||
Sbjct 6708 CAGATCTTCGTCAAGACCCTCACTGGCAAGACGATCACGTTGGAGGTGGAAAGCTCGGAC 6649
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||| || || || || |||||||| ||||||||
Sbjct 6648 ACGATCGACAACGTCAAGAGCAAGATTCAAGATAAGGAGGGCATCCCTCCCGACCAGCAG 6589
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| ||||| || |||||||| || ||| |||| || | || || ||| ||
Sbjct 6588 CGTCTGATCTTTGCCGGTAAGCAGCTCGAGGACGGACGGACGCTCTCGGACTACAACATC 6529
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || ||||| || ||
Sbjct 6528 CAGAAGGAGAGTACGCTGCACCTGGT 6503
Score = 134 bits (148), Expect = 3e-26
Identities = 151/201 (75%), Gaps = 1/201 (0%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || ||||| ||||| || |||||||| ||||| ||| | ||||||||||
Sbjct 7157 TCGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTTGAATCCAGCGACACCATCG 7098
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| || || || ||||| |||||||| || || |||||||| || ||||| || | |
Sbjct 7097 ACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGTTTGA 7038
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
||||||| || || ||||| || ||||| | || || |||| || ||| ||||||| |
Sbjct 7037 TCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAAAAGG 6978
Query 178111 AATCAACACTGCATCTTGTTT 178131
|||| || || || |||| ||
Sbjct 6977 AATCCACGCTCCA-CTTGGTT 6958
Score = 123 bits (136), Expect = 6e-23
Identities = 142/190 (75%), Gaps = 6/190 (3%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCA 177999
|||| || || || |||||||||||||| || ||| ||||||||||| |||||||
Sbjct 7439 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC---GACACCATCGACAACGTCA 7383
Query 178000 AACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCG 178059
| ||||| |||||||| || || ||||| || || ||||| || || |||||||| |
Sbjct 7382 AGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAGCAGCGTCTGATCTTCGCTG 7323
Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACAC 178119
| || ||||| || ||||| | ||||| |||| || ||| |||| || || || || |
Sbjct 7322 GCAAGCAGCTTGAGGATGGTCGCACTCTGTCCGACTACAACATCCAGAAGGAGTCCACCC 7263
Query 178120 TGCATCTTGT 178129
| || || ||
Sbjct 7262 TTCACCTCGT 7253
>seq245
Length=44002
Score = 111 bits (122), Expect = 4e-19
Identities = 140/191 (73%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || || || || || || || |||||||| || || ||| |||||
Sbjct 3840 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 3896
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| |||||||| ||||| |||||||| || || || || || |||||||| ||
Sbjct 3897 CATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCG 3956
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
||||||||||| || || ||||| || ||||| | || || ||| || ||| ||||
Sbjct 3957 TCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 4016
Query 178106 AAAAGAATCAA 178116
|| | || ||
Sbjct 4017 GAAGGTATGAA 4027
>seq155
Length=53423
Score = 98.7 bits (108), Expect = 2e-15
Identities = 114/154 (74%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 214264 TACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGACCGGGAGCCTCG 214323
|||||||| ||||| | ||||| || ||||| ||||| | || || |||||||||
Sbjct 16670 TACTTTTCGTAAAGGGCATCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCG 16729
Query 214324 TTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATGAAAAGGTCGGAA 214383
||||||||||| || |||| | || || || || | |||||||| ||||| | |
Sbjct 16730 TTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGA 16789
Query 214384 GTCCAGATTGCATAAAAAATCTCTCTGGCTCTCA 214417
||||||| ||||| |||| || | ||||||||
Sbjct 16790 GTCCAGAGAGCATAGAAAAGATCACGGGCTCTCA 16823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203651741703488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |