Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1950 87.8 2e-12 >seq1950 Length=31834 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| || ||||| || | | ||| |||| ||||| |||||||| || |||||| Sbjct 30133 ATATAAGTGTCAATTAGAAGAGAGTAAGTTTCCGAGTGGATGTTCTCAATCATGATCTGA 30074 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || ||||||||||| ||||| || | | || || || || || || || |||| Sbjct 30073 AAACCATAGAAGCAACGAGCTTCAGGGACCTGGACCTCTCCGCTGAAACGCTCAAGCAGG 30014 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 ||||| || || || || || |||||||| || || | | ||| ||||| || Sbjct 30013 TTCTCGTTGACAATGCCATCGGAGGCAGCAAAGAAAGCAAGGACGTGGGAGATGAAGTAG 29954 Query 16652 TTTTCGTCAGATGTAA---GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708 |||||| | | | | ||||| || | | ||| ||||| | ||| | ||| Sbjct 29953 CGCTCGTCATCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATCTCT 29894 Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 || | ||||| || |||| | ||||| || ||||||| ||| || Sbjct 29893 TCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCAGAT 29847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511397600036960