Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq932 181 1e-40 >seq932 Length=59417 Score = 181 bits (200), Expect = 1e-40 Identities = 594/910 (65%), Gaps = 16/910 (2%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 || ||||| || || |||||| |||| ||||| || | ||||| | | | | Sbjct 37071 TCGAACTCATCGCCATAAACATCCGCCAAGCCAGGGGCCTCGTTAGGACAGAATAGAGTC 37130 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 54069 || || |||| ||| || | ||||| || ||||| || |||| ||||| ||| || Sbjct 37131 CATTCGCCGTTGGCCTCGACCCTCTTCATGAACAGATCTGGGGTCCAGAGAGC-ATAGAA 37189 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 || || | | ||| ||| || || || ||||| ||||| | |||| | | Sbjct 37190 GAGGTCACGTGCTCTGACTTCTTCCTTACCGTGGTTCTTCCGGAGATCCAAGAACTCGAA 37249 Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 | |||||| ||||| || || ||||| |||| | | | || || || ||||| ||||| Sbjct 37250 GACATCAGAGTGCCAAGGCTCTAAGTAAATGGCAAAAGCACCTGGACGCTTGTTGCCTCC 37309 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 |||||||| ||||| || ||||| || | || | | ||| |||| ||||| || || Sbjct 37310 CTGATCTACATATCTGGCAGTGTTGTTGAACACCCGAAGCATGGGAACGATACCGTTAGA 37369 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 54307 | ||| ||||| ||| || ||| ||| | |||||||| || ||| || Sbjct 37370 GGAACCGTTGGTACCGCCAATGTAGGAACCAGTAGCACGAATGCGGTGAACGTTG--AGG 37427 Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCC 54366 || || || || || | ||||| || || || || ||| |||| || |||||||| || Sbjct 37428 CCGATTCCACCAGCAGTCTTAGAAATCAACGCACA-CGTCTTAAGTGTGTCATAGATACC 37486 Query 54367 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 54426 || |||||||| ||| |||||| | || || || || | || | || ||| Sbjct 37487 TTCGATACTATCCTCCTTCATGTCGACAAGGAAGCAAGAAGCGAGCTGAGGCTGAGGAGT 37546 Query 54427 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 54486 || || || || || || ||||| || || ||||| |||| | || | | | || Sbjct 37547 GCCGGCGTTGAACAAAGTGGGAGAGGCATGTGTAAAGAATTTCTGGGACATCAAGTGATA 37606 Query 54487 CGTCTCGATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAAC 54544 ||||| ||||| || |||| |||| || ||||| || | ||||||||| ||| Sbjct 37607 GGTCTCAATAGCCTTCTCGATAT--CATTACCGTGGATTCCAACAGAGACACGCATCAAC 37664 Query 54545 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAA 54604 | ||| ||||| | ||| ||| ||| || || ||||||||| || || | Sbjct 37665 AGGTGTTGAGGACGCTCAGCGACCTTCCCGTCAATCCGCAGCAAGTATGACCGCTCAAGT 37724 Query 54605 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGT 54664 || || || || || ||||||| ||||| || || || | ||| | ||||||||| Sbjct 37725 GTCTTGAAGCCGAAGAAGTTGTAGTTGAAGTCACGGTCATATACGATAGCCGAGTTGAGT 37784 Query 54665 TTATCCTTATATTTGTTAACTACATC-CATGGTAATAC-TTGAAATAATCGGAGAATGTT 54722 | || || ||| ||| || || ||| | | | |||| || ||||| | ||| Sbjct 37785 TCGTCGGCATGTTTCATAATTATCTCATATGTT--TCCTTTGAGATCATCGGTGCGGGTT 37842 Query 54723 TCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGttttt 54782 || || || || ||||| |||| | | || || || || | || | Sbjct 37843 TCTTGTTCTTTGGGTTGACGTAGTGGTAGAGGTCAGAGATAACCAAGGAGAACTGCTTCT 37902 Query 54783 ttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGAT 54842 | |||| ||||| || || || || ||||| | ||| || ||||| || || || || | Sbjct 37903 TGGTTTGCTTGTGAAGGTTGGAAACTGCTATACGAGCAGCGAGAATAGCGTAGTCTGGGT 37962 Query 54843 GTTGTGTAGT 54852 || ||||| Sbjct 37963 GTGTGGTAGT 37972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593702096245440