Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1950 176 5e-39 seq2204 138 1e-27 seq1309 100 3e-16 seq340 93.3 4e-14 >seq1950 Length=31834 Score = 176 bits (194), Expect = 5e-39 Identities = 197/260 (76%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| ||| ||| | || || Sbjct 29847 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAAGAGATTGATCTC 29906 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| ||||||| | ||| ||||||| |||||||| | |||||| Sbjct 29907 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGATGACGAGCGCTACTTCATCTCC 29966 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || || || ||| ||| ||||| ||||||||||| ||| | |||||| Sbjct 29967 CACGTCCTTGCTTTCTTTGCTGCCTCCGATGGCATTGTCAACGAGAACCTGCTTGAGCGT 30026 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | ||||| ||||| | || || || |||||||| || ||||||||| || Sbjct 30027 TTCAGCGGA-GAGGTCCAGGTCCCTGAAGCTCGTTGCTTCTATGGTTTTCAGATCATGAT 30085 Query 116872 GGAGAACGTGCACTCGGAAA 116891 |||||| | |||||||||| Sbjct 30086 TGAGAACATCCACTCGGAAA 30105 >seq2204 Length=165236 Score = 138 bits (152), Expect = 1e-27 Identities = 139/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || |||||||| || ||||| ||| ||||||| || | | ||||| | | Sbjct 76656 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 76715 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | |||||| || || | ||||| |||||||||||| |||||||||| || || Sbjct 76716 GACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTG 76775 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || ||||| || || | |||||||| | ||||||||||||||||||| Sbjct 76776 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAAG 76835 Query 40879 G 40879 | Sbjct 76836 G 76836 >seq1309 Length=113461 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 40775 AAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAAC 40834 || ||| ||||| ||||| |||||| | |||||||| || || |||| ||| ||||| | Sbjct 106802 AATTTCCAGACAAGGAGGGAATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGC 106861 Query 40835 AGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATC 40894 |||| || || | || || || ||||||||||||||||||||| |||| || || | Sbjct 106862 AGCTCGAGGATGGCCGTACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTTCACC 106921 Query 40895 TAGTGTTGCGCTTGAGGGGCGGCGG 40919 | ||| | ||| || | || || || Sbjct 106922 TCGTGCTCCGCCTGCGTGGTGGTGG 106946 >seq340 Length=15397 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 ||||||| || ||||| || || ||||||||| |||| || ||| | | ||| | | Sbjct 14515 TCGTAAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTGGAATCGAGCGATACTATCG 14574 Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819 | | | ||| || || | || || || || ||||| | |||||||| || || | Sbjct 14575 ATAATGTTAAGAGCAAGATCCAGGATAAGGAAGGAATCCCTCCTGACCAGCAGCGTCTGA 14634 Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 ||| ||| || |||||||| || || | || || || ||| || || |||||||||| Sbjct 14635 TCTTCGCTGGTAAACAGCTTGAGGATGGCCGTACTCTATCCGATTATAATATCCAGAAGG 14694 Query 40880 AGGCCACGCTGCATCTAGT 40898 || |||| || || ||||| Sbjct 14695 AGTCCACTCTTCACCTAGT 14713 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||||| || ||||| ||||| |||| || ||| | || Sbjct 14733 ATGCAGATCTTTGTCAAAACACTCACTGGAAAAACGATCACGCTCGAGGTTGAATCATCC 14792 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | || || || | ||||| ||||| ||||| ||||||| Sbjct 14793 GATACAATTGACAATGTGAAATCTAAGATCCAAGACAAGGAGGGAATCCCTCCGGACCAA 14852 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||| | ||| || || ||||| || || | || ||| | ||||||||| Sbjct 14853 CAACGTCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGTCTGACTACAAC 14912 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||| | || || || Sbjct 14913 ATCCAGAAAGAGTCTACACTTCA 14935 Score = 89.7 bits (98), Expect = 5e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| ||||| |||||||| | || ||||| ||| ||||| | | | | | ||| Sbjct 14222 TCACCGGCAAGACCATCACTTTGGAGGTCGAGTCCAGCGACACCATCGACAATGTTAAGA 14281 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || || | ||||| ||||||||||| | |||||||| || | |||| ||| || | Sbjct 14282 GCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGTTTGATCTTCGCTGGAA 14341 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | || || || || | || |||||| ||| || ||||| ||||||||| | || || | Sbjct 14342 AGCAACTTGAAGATGGCCGTACCCTCTCCGATTATAACATTCAGAAGGAGTCTACTCTCC 14401 Query 40892 ATCTAGT 40898 | || || Sbjct 14402 ACCTTGT 14408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515202275049280