Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016
-07-29] 2,628 sequences; 39,903,795 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq340 129 5e-25
seq2204 100 2e-16
seq1309 91.5 1e-13
>seq340
Length=15397
Score = 129 bits (142), Expect = 5e-25
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| |||| | | |||||||| | |||||||||||| || |||||||| ||
Sbjct 14961 TACCTCCACGTAGACGAAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCAG 14902
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || |||||| ||||| ||||| ||| | |||||||| || || || ||||
Sbjct 14901 ACAAGGTACGACCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCCGGAG 14842
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || |||||||||||| || || ||| || | || | || || | || | ||
Sbjct 14841 GGATTCCCTCCTTGTCTTGGATCTTAGATTTCACATTGTCAATTGTATCGGATGAT-TCA 14783
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||| || | |||||| || || || ||||| ||||| ||||||||
Sbjct 14782 ACCTCGAGCGTGATCGTTTTTCCAGTGAGTGTTTTGACAAAGATCTGCAT 14733
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || |||||||||||||| | ||||| |||||| ||||| || ||||| |
Sbjct 15152 CTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGTCCATCCTCAAGCTGCTTACCAGCAAA 15093
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
||| |||||||||||||| || || || |||||||| ||| ||||| || || |
Sbjct 15092 GATAAGACGCTGCTGATCTGGTGGAATACCCTCCTTATCTTGGATTTTCGACTTCACGTT 15033
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|| | ||||| | |||||| || || | || | || |||||||| || || || ||
Sbjct 15032 ATCAATTGTGTCTGAGCTCTCAACTTCCAATGTGATAGTCTTGCCGGTGAGCGTCTTAAC 14973
Query 118727 AAAAATCTGCAT 118738
||||||||||||
Sbjct 14972 AAAAATCTGCAT 14961
Score = 109 bits (120), Expect = 5e-19
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| |||||||| || |||||||| |||||| | || || ||| || || ||
Sbjct 14403 GTGGAGAGTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTACGGCCATCTTCAAGTTG 14344
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||||||| |||| | ||||||||| || ||||| |||||||||||||| || ||
Sbjct 14343 CTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTT 14284
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||||| | |||| |||||| || ||||||||| | || | || ||||||||
Sbjct 14283 GCTCTTAACATTGTCGATGGTGTCGCTGGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 14224
Score = 84.2 bits (92), Expect = 2e-11
Identities = 132/188 (70%), Gaps = 6/188 (3%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || || || |||||| | ||| || |||||| |||||||| |||
Sbjct 14701 GTGGACTCCTTCTGGATATTATAATCGGATAGAGTACGGCCATCCTCAAGCTGTTTACCA 14642
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| ||||||||||| || ||||| || || ||||| || || || |||
Sbjct 14641 GCGAAGATCAGACGCTGCTGGTCAGGAGGGATTCCTTCCTTATCCTGGATCTTGCTCTTA 14582
Query 118662 ACCTGTTCGACGGTGTCCGTGCTC---TCGACCTCGACGGTCACCGTTTTGCCGGTCAGA 118718
|| | |||| || || |||| || ||||||| ||| | || || || || ||
Sbjct 14581 ACATTATCGATAGTATC---GCTCGATTCCACCTCGAGGGTGATGGTCTTTCCAGTGAGG 14525
Query 118719 GTTTTTAC 118726
|| |||||
Sbjct 14524 GTCTTTAC 14517
>seq2204
Length=165236
Score = 100 bits (110), Expect = 2e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||||||| ||||| |||||| ||||| || |||||| ||||
Sbjct 76834 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 76775
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
||||||||||| || || || |||||||||||||| || || || || | |||
Sbjct 76774 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 76715
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| |||||| | ||| || |||| ||| | || || || || || || || || |||
Sbjct 76714 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAAA 76655
>seq1309
Length=113461
Score = 91.5 bits (100), Expect = 1e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | || ||||| || || |||||||| || | ||| || ||||||
Sbjct 106926 CACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCCTC 106867
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || |||||| |||| ||||||||||| || || || || |||||||||||||
Sbjct 106866 GAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCTGG 106807
Query 118649 AATTT 118653
|| ||
Sbjct 106806 AAATT 106802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433816504954576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |