Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1950 129 5e-25 seq340 104 2e-17 seq2204 86.0 6e-12 >seq1950 Length=31834 Score = 129 bits (142), Expect = 5e-25 Identities = 228/328 (70%), Gaps = 12/328 (4%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 ||||||||||| ||||| ||||| ||||| || || ||||| | || || ||| || Sbjct 30313 GCGTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGATCTTTTGCCTCCATCTTCTGGCTG 30372 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||| ||||||| || || || || |||||| | || || || || ||| Sbjct 30373 AAGAAGCGTGGCTTGATGCCTGGTCTCACCTTCTCTAACGAGCTTATCTCTCGTGATGAG 30432 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160 |||||||| ||||| ||||| || || | | |||||| | | || ||||| | | Sbjct 30433 GGTCTCCACACTGACTTTGCTTGTCTGCTATTCTCTCA---TCTGAA-GAACCGTCCC-- 30486 Query 58161 GATCGC---ATCTT---GGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 |||| | || | |||| ||||| ||||| ||||| || || || ||||| | Sbjct 30487 GATCCCCAGGTCGTGGAGGACGTTATCGTGGAGGCTGTCGCCATTGAGAAGGAGTTCTTG 30546 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || || || ||| | ||||| ||||| |||||| ||||||| Sbjct 30547 ACTGATGCTCTTCCTTGTGCCCTCCTCGGCATGAATGCCACCCTGATGTGCCAGTACATC 30606 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCG 58302 || || ||||||||| | |||||| ||| Sbjct 30607 GAATTCGTTGCCGACCGTCTTTTGGTCG 30634 >seq340 Length=15397 Score = 104 bits (114), Expect = 2e-17 Identities = 158/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||||||||| || || || || || |||||| |||| || ||| || ||| | | ||| Sbjct 14515 TCGTAAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTGGAATCGAGCGATACTATCG 14574 Query 31263 AAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 | | || || ||| || | | ||| |||||||| | || || ||||||||||||| Sbjct 14575 ATAATGTTAA---GAGCAAGATCCAGGATAAGGAAGGAATCCCTCCTGACCAGCAGCGTC 14631 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || |||||||| |||||| | || || ||| | ||||||||| || || | Sbjct 14632 TGATCTTCGCTGGTAAACAGCTTGAGGATGGCCGTACTCTATCCGATTATAATATCCAGA 14691 Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | || || |||||||| || || ||| | ||| | || |||| Sbjct 14692 AGGAGTCCACTCTTCACCTAGTCCTTCGTCTGCGTGGTGGTA 14733 >seq2204 Length=165236 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| || || || || || || ||| |||||||||| || ||||| | Sbjct 76655 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 76714 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| ||| | || || |||||||||||||| Sbjct 76715 CGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCT 76774 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || |||||||| || ||| | || || || ||||||| || ||||| || || Sbjct 76775 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 76834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445751756573760