Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq932 190 3e-43 >seq932 Length=59417 Score = 190 bits (210), Expect = 3e-43 Identities = 596/910 (65%), Gaps = 16/910 (2%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 |||||||| || || |||||| |||| | ||| || | ||||| | | | | Sbjct 37071 TCGAACTCATCGCCATAAACATCCGCCAAGCCAGGGGCCTCGTTAGGACAGAATAGAGTC 37130 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307 || || |||| ||| || | ||||| || ||||| || |||| ||||| ||| || Sbjct 37131 CATTCGCCGTTGGCCTCGACCCTCTTCATGAACAGATCTGGGGTCCAGAGAGC-ATAGAA 37189 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || || | || ||| ||| || || || ||||| ||||| | |||| | | Sbjct 37190 GAGGTCACGTGCTCTGACTTCTTCCTTACCGTGGTTCTTCCGGAGATCCAAGAACTCGAA 37249 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | |||||| ||||| || || ||||| ||||| | | | || || || ||||| ||||| Sbjct 37250 GACATCAGAGTGCCAAGGCTCTAAGTAAATGGCAAAAGCACCTGGACGCTTGTTGCCTCC 37309 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 |||||||| ||||| || ||||| || | || | | ||| |||| |||||||| || Sbjct 37310 CTGATCTACATATCTGGCAGTGTTGTTGAACACCCGAAGCATGGGAACGATACCGTTAGA 37369 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAA--TTGATAGA 63545 ||| ||||||||| || ||| ||| | |||||||| || ||| || Sbjct 37370 GGAACCGTTGGTACCGCCAATGTAGGAACCAGTAGCACGAATGCGGTGAACGTTG--AGG 37427 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATGCC 63604 || ||||| || || | ||||| || || || || ||| |||| ||||||||||| || Sbjct 37428 CCGATTCCACCAGCAGTCTTAGAAATCAACGCACA-CGTCTTAAGTGTGTCATAGATACC 37486 Query 63605 TTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGT 63664 ||| || ||||| || |||||| | || || || || | || | ||| ||| Sbjct 37487 TTCGATACTATCCTCCTTCATGTCGACAAGGAAGCAAGAAGCGAGCTGAGGCTGAGGAGT 37546 Query 63665 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63724 || || || || || || ||||| || || ||||| |||| | || | | | || Sbjct 37547 GCCGGCGTTGAACAAAGTGGGAGAGGCATGTGTAAAGAATTTCTGGGACATCAAGTGATA 37606 Query 63725 CGTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAAC 63782 ||||||||||| || |||| |||| || ||||| || | ||||||||| ||| Sbjct 37607 GGTCTCAATAGCCTTCTCGATAT--CATTACCGTGGATTCCAACAGAGACACGCATCAAC 37664 Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842 | ||| ||||| | ||| | | || || || || |||||| || || | Sbjct 37665 AGGTGTTGAGGACGCTCAGCGACCTTCCCGTCAATCCGCAGCAAGTATGACCGCTCAAGT 37724 Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902 || || || || || ||||||| ||||| || || || | ||| |||| ||||| Sbjct 37725 GTCTTGAAGCCGAAGAAGTTGTAGTTGAAGTCACGGTCATATACGATAGCCGAGTTGAGT 37784 Query 63903 TTATCCTTATATTTGTTAACTATATC-CATGGTAATAC-TTGAAATAATCGGAGAATGTT 63960 | || || ||| ||| ||| || ||| | | | |||| || ||||| | ||| Sbjct 37785 TCGTCGGCATGTTTCATAATTATCTCATATGTT--TCCTTTGAGATCATCGGTGCGGGTT 37842 Query 63961 TCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttt 64020 || || || || || || |||| | | | || || || || | || | Sbjct 37843 TCTTGTTCTTTGGGTTGACGTAGTGGTAGAGGTCAGAGATAACCAAGGAGAACTGCTTCT 37902 Query 64021 ttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGAT 64080 | |||| |||||| || || || | ||||| | || || ||||| || || || || | Sbjct 37903 TGGTTTGCTTGTGAAGGTTGGAAACTGCTATACGAGCAGCGAGAATAGCGTAGTCTGGGT 37962 Query 64081 GTTGTGTAGT 64090 || ||||| Sbjct 37963 GTGTGGTAGT 37972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629796910491840