Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016
-07-29] 2,628 sequences; 39,903,795 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq340 87.8 2e-12
>seq340
Length=15397
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | ||| | ||| | |||||||| || |||||||||||||||
Sbjct 14426 CCACCACGGAGACGAAGAACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCGGAG 14367
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||||| || || || ||||| |||||| ||| ||||| || |||||
Sbjct 14366 AGGGTACGGCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 14307
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| ||| || || | | || | |||||| ||| ||| |||
Sbjct 14306 ATGCCCTCCTTGTCCTGGATCTTGCTCTTAACATTGTCGATGGTGTCGCTGGACTCGACC 14247
Query 139718 TCAACGGTCACCGTCTTGCCGGT 139740
|| | || | |||||||||||
Sbjct 14246 TCCAAAGTGATGGTCTTGCCGGT 14224
Score = 82.4 bits (90), Expect = 8e-11
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCAT 139631
||| || |||||||| ||||| | |||| || | || || ||||| |||||||||
Sbjct 15152 CTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGTCCA-TCCTCAAGCTGCTTACCAGCAA 15094
Query 139632 AGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCT 139691
|||| ||||| |||||||| || || || || || || || |||||| || | |
Sbjct 15093 AGATAAGACGCTGCTGATCTGGTGGAATACCCTCCTTATCTTGGATTTTCGACTTCACGT 15034
Query 139692 GTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTA 139751
|| | |||||| | | ||| || || | || | ||||||||||| | ||| || |
Sbjct 15033 TATCAATTGTGTCTGAGCTCTCAACTTCCAATGTGATAGTCTTGCCGGTGAGCGTCTTAA 14974
Query 139752 CGAATATTTGCATAGCT 139768
| || || |||||| ||
Sbjct 14973 CAAAAATCTGCATACCT 14957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496047704297600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |