Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq340 87.8 2e-12 >seq340 Length=15397 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| | ||| | |||||||| || ||||||||||||||| Sbjct 14426 CCACCACGGAGACGAAGAACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCGGAG 14367 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| || || || ||||| |||||| ||| ||||| || ||||| Sbjct 14366 AGGGTACGGCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 14307 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | |||||| ||| ||| ||| Sbjct 14306 ATGCCCTCCTTGTCCTGGATCTTGCTCTTAACATTGTCGATGGTGTCGCTGGACTCGACC 14247 Query 139718 TCAACGGTCACCGTCTTGCCGGT 139740 || | || | ||||||||||| Sbjct 14246 TCCAAAGTGATGGTCTTGCCGGT 14224 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCAT 139631 ||| || |||||||| ||||| | |||| || | || || ||||| ||||||||| Sbjct 15152 CTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGTCCA-TCCTCAAGCTGCTTACCAGCAA 15094 Query 139632 AGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCT 139691 |||| ||||| |||||||| || || || || || || || |||||| || | | Sbjct 15093 AGATAAGACGCTGCTGATCTGGTGGAATACCCTCCTTATCTTGGATTTTCGACTTCACGT 15034 Query 139692 GTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTA 139751 || | |||||| | | ||| || || | || | ||||||||||| | ||| || | Sbjct 15033 TATCAATTGTGTCTGAGCTCTCAACTTCCAATGTGATAGTCTTGCCGGTGAGCGTCTTAA 14974 Query 139752 CGAATATTTGCATAGCT 139768 | || || |||||| || Sbjct 14973 CAAAAATCTGCATACCT 14957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496047704297600