Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq932 188 1e-42 seq1950 96.9 5e-15 >seq932 Length=59417 Score = 188 bits (208), Expect = 1e-42 Identities = 545/826 (66%), Gaps = 16/826 (2%) Strand=Plus/Plus Query 72028 TTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTC 72086 ||||| || ||||| || |||| ||||| ||| || || || | | ||| || || Sbjct 37155 TTCATGAACAGATCTGGGGTCCAGAGAGC-ATAGAAGAGGTCACGTGCTCTGACTTCTTC 37213 Query 72087 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 72146 || || ||||| ||||| | |||| | | | |||||| ||||| || || || Sbjct 37214 CTTACCGTGGTTCTTCCGGAGATCCAAGAACTCGAAGACATCAGAGTGCCAAGGCTCTAA 37273 Query 72147 GTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 72206 ||| ||||| | | | || || || ||||| ||||||||||||| ||||| || ||||| Sbjct 37274 GTAAATGGCAAAAGCACCTGGACGCTTGTTGCCTCCCTGATCTACATATCTGGCAGTGTT 37333 Query 72207 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 72266 || | || | | ||| |||| ||||| || || | ||| ||||| ||| || || Sbjct 37334 GTTGAACACCCGAAGCATGGGAACGATACCGTTAGAGGAACCGTTGGTACCGCCAATGTA 37393 Query 72267 GCTTCCACTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAG 72324 | ||| | |||||||| | || ||| || || ||||| || || | ||||| Sbjct 37394 GGAACCAGTAGCACGAATGCGGTGAACGTTG--AGGCCGATTCCACCAGCAGTCTTAGAA 37451 Query 72325 ATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 72383 || || || || ||| |||| || |||||||| || || |||||||| ||| |||||| Sbjct 37452 ATCAACGCACA-CGTCTTAAGTGTGTCATAGATACCTTCGATACTATCCTCCTTCATGTC 37510 Query 72384 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 72443 | || || || || | || | || ||| || || || || || || ||||| Sbjct 37511 GACAAGGAAGCAAGAAGCGAGCTGAGGCTGAGGAGTGCCGGCGTTGAACAAAGTGGGAGA 37570 Query 72444 AGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC 72503 || || ||||| |||| | |||| | | || ||||||||||| |||| || Sbjct 37571 GGCATGTGTAAAGAATTTCTGGGACATCAAGTGATAGGTCTCAATAGC--CTTCTCGATA 37628 Query 72504 CCATT--GATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATC 72561 |||| || ||||| || | ||||||||| |||| || ||||| | ||| ||| | Sbjct 37629 TCATTACCGTGGATTCCAACAGAGACACGCATCAACAGGTGTTGAGGACGCTCAGCGACC 37688 Query 72562 TTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 72621 || | || || |||||| || || | || || || || || ||||||| Sbjct 37689 TTCCCGTCAATCCGCAGCAAGTATGACCGCTCAAGTGTCTTGAAGCCGAAGAAGTTGTAG 37748 Query 72622 GAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATA 72681 ||||| || || || | ||| |||| ||||||| || || ||| ||| ||| Sbjct 37749 TTGAAGTCACGGTCATATACGATAGCCGAGTTGAGTTCGTCGGCATGTTTCATAATTATC 37808 Query 72682 TCCATGGTGATAC--TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 72739 | ||| || | | |||| || ||||| | ||||| || || || || || |||| Sbjct 37809 T-CAT-ATGTTTCCTTTGAGATCATCGGTGCGGGTTTCTTGTTCTTTGGGTTGACGTAGT 37866 Query 72740 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 72799 | | | || || || || | || || |||| |||||| || || || | Sbjct 37867 GGTAGAGGTCAGAGATAACCAAGGAGAACTGCTTCTTGGTTTGCTTGTGAAGGTTGGAAA 37926 Query 72800 CGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGT 72845 | ||||| | || || ||||| || || ||||| ||| ||||| Sbjct 37927 CTGCTATACGAGCAGCGAGAATAGCGTAGTCTGGGTGTGTGGTAGT 37972 >seq1950 Length=31834 Score = 96.9 bits (106), Expect = 5e-15 Identities = 151/214 (71%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 || ||| || || || ||| ||||||||||| | | || | ||||| || || || Sbjct 30459 CAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTAGAGAAGGT 30400 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 ||| || ||||| | ||||||||| || ||||| || || || ||||| |||||||| || Sbjct 30399 GAGACCAGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAAAGATCCAGAGAA 30340 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC-ATAACCG--GCACTGTC 42237 |||||| || || || || || || || | || | || || | || | | || Sbjct 30339 GAAGATACCCTCGACAGCGGCGAACGCCACGAGACGCTGACCGAAGGTCGATTCCTTATC 30280 Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTT 42271 || |||||| | |||||| |||||||||||| Sbjct 30279 CTGGATCCACCTGATAGCCCAGTCGGCCTTCTTT 30246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671117153077280