Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016
-07-29] 2,628 sequences; 39,903,795 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1950 136 6e-27
>seq1950
Length=31834
Score = 136 bits (150), Expect = 6e-27
Identities = 205/284 (72%), Gaps = 8/284 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||| || || ||||| | ||||||| | |||||
Sbjct 29847 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAAGAGATTGATCTC 29906
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | || ||| || ||||| | || || ||
Sbjct 29907 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGATGACGAGCGCTACTTCATCTCC 29966
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197
||| | | || |||||||| | ||||||||| || |||||||| || ||| |||| ||
Sbjct 29967 CACGTCCTTGCTTTCTTTGCTGCCTCCGATGGCATTGTCAACGAGAACCTGCTTGAG-CG 30025
Query 125198 ATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCGT-GCTTTTACGGATTCCAAATCAT 125254
||| |||| | ||| | || || | |||| |||| || || || || |||||
Sbjct 30026 TTTCAGCGGAGAGGT--CCAGGTCCCTGAAGC-TCGTTGCTTCTATGGTTTTCAGATCAT 30082
Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACA 125298
|||||||||| | |||||||||| |||||| || |||||||
Sbjct 30083 GATTGAGAACATCCACTCGGAAACTTACTCTCTTCTAATTGACA 30126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741034856205280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |