Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq340 98.7 2e-15 seq1950 86.0 1e-11 >seq340 Length=15397 Score = 98.7 bits (108), Expect = 2e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || ||||||||||| || || |||||||| || || ||||| || || | || || Sbjct 15172 AGGACTAGATGTAAGGTGCTCTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGTCCATCC 15113 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || |||||||| || || | ||| ||||| || || || || || ||||| Sbjct 15112 TCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCTGGTGGAATACCCTCCTTATCT 15053 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526 || || || | || || || || | || || || | || || || | ||| ||||| Sbjct 15052 TGGATTTTCGACTTCACGTTATCAATTGTGTC-TGAGCTCTCAACTTCCAATGTGATAGT 14994 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || || || ||||| |||||||| Sbjct 14993 CTTGCCGGTGAGCGTCTTAACAAAAATCTGCAT 14961 >seq1950 Length=31834 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || || |||||||| || ||||| ||||| || || ||||||||| | ||||| ||| Sbjct 30310 GTGGCGTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGATCTTTTGCCTCCATCTTCTGG 30369 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||| | ||| | ||||| || | || ||||||||||| | || | || Sbjct 30370 CTGAAGAAGCGTGGCTTGATGCCTGGTCTCACCTTCTCTAACGAGCTTATCTCTCGTGAT 30429 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGTTTATTATT 269292 || ||| | ||| ||||| |||||| | |||| Sbjct 30430 GAGGGTCTCCACACTGACTTTGCTTGTCTGCTATT 30464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151359630976624