Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016
-07-29] 2,628 sequences; 39,903,795 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq340 98.7 2e-15
seq1950 86.0 1e-11
>seq340
Length=15397
Score = 98.7 bits (108), Expect = 2e-15
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| ||||||||||| || || |||||||| || || ||||| || || | || ||
Sbjct 15172 AGGACTAGATGTAAGGTGCTCTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGTCCATCC 15113
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || |||||||| || || | ||| ||||| || || || || || |||||
Sbjct 15112 TCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCTGGTGGAATACCCTCCTTATCT 15053
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526
|| || || | || || || || | || || || | || || || | ||| |||||
Sbjct 15052 TGGATTTTCGACTTCACGTTATCAATTGTGTC-TGAGCTCTCAACTTCCAATGTGATAGT 14994
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || || || ||||| ||||||||
Sbjct 14993 CTTGCCGGTGAGCGTCTTAACAAAAATCTGCAT 14961
>seq1950
Length=31834
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
|| || || |||||||| || ||||| ||||| || || ||||||||| | ||||| |||
Sbjct 30310 GTGGCGTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGATCTTTTGCCTCCATCTTCTGG 30369
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
||||||| | ||| | ||||| || | || ||||||||||| | || | ||
Sbjct 30370 CTGAAGAAGCGTGGCTTGATGCCTGGTCTCACCTTCTCTAACGAGCTTATCTCTCGTGAT 30429
Query 269258 GAAGGTTTACACTGCGACTTCGCTTGTTTATTATT 269292
|| ||| | ||| ||||| |||||| | ||||
Sbjct 30430 GAGGGTCTCCACACTGACTTTGCTTGTCTGCTATT 30464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151359630976624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |