Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016
-07-29] 2,628 sequences; 39,903,795 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1024 206 4e-49
seq2302 181 2e-41
>seq1024
Length=56786
Score = 206 bits (228), Expect = 4e-49
Identities = 196/248 (79%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| | | || || |||||||| || ||||| ||||| ||||
Sbjct 44746 CGCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATCCAGGGTATCACTAAGCCCGCTA 44688
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||||||||| |||||||||||||| ||||||||| |||||| || |||| || ||||
Sbjct 44687 TCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 44628
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | |||| |||||| || || |||| ||||||| || ||| || |
Sbjct 44627 CCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGATGCTGTCACCTACACTG 44568
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||||||||| || | ||| |||||||||| |||| |||||||
Sbjct 44567 AGCACGCCAAGCGCAAGACTGTCACTTCTCTCGATGTCGTCTATGCCCTGAAGCGTCAAG 44508
Query 16671 GCCGTAAG 16678
| ||||||
Sbjct 44507 GACGTAAG 44500
>seq2302
Length=29981
Score = 181 bits (200), Expect = 2e-41
Identities = 188/244 (77%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || |||||||| || ||||| ||||| ||||
Sbjct 21539 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACTAAGCCTGCTA 21597
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| |||||||| || ||||||||||| ||||||||| |||| | || |||| || ||||
Sbjct 21598 TTCGTCGTCTTGCGCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 21657
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | ||| |||||| || |||| |||| ||| || || ||| ||||
Sbjct 21658 CCCGTGGTGTCCTCAAGTCTTTCCTCGAGTCCGTCATCCGTGACGCCGTCACCTACACCG 21717
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| |||||||| ||||| | |||||||| | || || || |
Sbjct 21718 AGCACGCCAAGCGCAAGACCGTCACCTCGCTGGATGTGGTCTATGCCCTCAAGCGCCAGG 21777
Query 16671 GCCG 16674
||||
Sbjct 21778 GCCG 21781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072797201204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |