Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1024 206 4e-49 seq2302 181 2e-41 >seq1024 Length=56786 Score = 206 bits (228), Expect = 4e-49 Identities = 196/248 (79%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| | | || || |||||||| || ||||| ||||| |||| Sbjct 44746 CGCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATCCAGGGTATCACTAAGCCCGCTA 44688 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 44687 TCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 44628 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | |||| |||||| || || |||| ||||||| || ||| || | Sbjct 44627 CCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGATGCTGTCACCTACACTG 44568 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||||||||| || | ||| |||||||||| |||| ||||||| Sbjct 44567 AGCACGCCAAGCGCAAGACTGTCACTTCTCTCGATGTCGTCTATGCCCTGAAGCGTCAAG 44508 Query 16671 GCCGTAAG 16678 | |||||| Sbjct 44507 GACGTAAG 44500 >seq2302 Length=29981 Score = 181 bits (200), Expect = 2e-41 Identities = 188/244 (77%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||| ||||| |||| Sbjct 21539 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACTAAGCCTGCTA 21597 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | |||||||| || ||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 21598 TTCGTCGTCTTGCGCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 21657 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | ||| |||||| || |||| |||| ||| || || ||| |||| Sbjct 21658 CCCGTGGTGTCCTCAAGTCTTTCCTCGAGTCCGTCATCCGTGACGCCGTCACCTACACCG 21717 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| |||||||| ||||| | |||||||| | || || || | Sbjct 21718 AGCACGCCAAGCGCAAGACCGTCACCTCGCTGGATGTGGTCTATGCCCTCAAGCGCCAGG 21777 Query 16671 GCCG 16674 |||| Sbjct 21778 GCCG 21781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072797201204