Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq340 95.1 1e-14 seq1950 91.5 1e-13 >seq340 Length=15397 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 24036 GAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGC 24095 || |||||| ||| |||||||||||| | || || ||||| ||||| || ||| Sbjct 14245 GAGGTCGAGTCCAGCGACACCATCGACAATGTTAAGAGCAAGATCCAGGACAAGGAGGGC 14304 Query 24096 ATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC 24155 || ||||| || || ||| | |||| | || || |||||||| ||||||| | | | | Sbjct 14305 ATCCCTCCTGACCAGCAGCGTTTGATCTTCGCTGGAAAGCAACTTGAAGATGGCCGTACC 14364 Query 24156 GTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 || ||||||||||||||| || || ||||| Sbjct 14365 CTCTCCGATTATAACATTCAGAAGGAGTCTAC 14396 >seq1950 Length=31834 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 ||| || || || || || || || || || ||||| || |||| || || || | ||| Sbjct 30741 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGGGAGATGTTGTCCAT 30682 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 || ||||| || || | || || || || | || |||||| ||| ||| || || Sbjct 30681 GAAGTCGAATGGGTTGGTGGCCTGGAAGTACTTCTTGTTGCCAAGGGCGACCAAAAGACG 30622 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACAT-AGAATGTGCATTCATGCCCAGCATTGCGA 104770 || || || ||||||||||||| |||||| || || ||||||||||| || | || Sbjct 30621 GTCGGCAACGAATTCGATGTACTGGCACATCAGGGTG-GCATTCATGCCGAGGAGGGCAC 30563 Query 104771 CGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTCC 104817 || | ||| | ||| || || || ||||| ||| | || || ||| Sbjct 30562 AAGGAAGAGCATCAGTCAAGAACTCCTTCTCAATGGCGACAGCCTCC 30516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429922229687340