Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1950 156 4e-33 seq2204 125 7e-24 seq340 107 2e-18 seq932 98.7 9e-16 seq1309 93.3 4e-14 >seq1950 Length=31834 Score = 156 bits (172), Expect = 4e-33 Identities = 341/501 (68%), Gaps = 11/501 (2%) Strand=Plus/Plus Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCAAC-AGCAGCACCGCGACTTTCGCCGAGCG 46157 ||||| |||||||||| || | ||||||| | | || | |||| |||| |||| Sbjct 30247 AAGAAGGCCGACTGGGCTATCAGGTGGATCCAGGATAAGGAAT-CGACCTTCGGTCAGCG 30305 Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217 | | ||||| || || ||| ||||| |||| || ||||| ||||||| ||||||| Sbjct 30306 TCTCGTGGCGTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGATCTTTTGCCTCCATCTT 30365 Query 46218 TTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCG 46277 | | || | ||| | ||||| || || || || |||||||| || || || Sbjct 30366 CTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACCTTCTCTAACGAGCTTATCTCTCG 30425 Query 46278 CGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAA 46337 || ||||| || || || |||||||| ||||| |||| | ||| || | || Sbjct 30426 TGATGAGGGTCTCCACACTGACTTTGCTTGTCTG--CTATT-CTCTCATCTGAAGAACCG 30482 Query 46338 GCTTGCGCCCGACACCGTGCTGAGCATGTT--CAAGGAGGCGGTGGCCATTGAGAAGGAG 46395 | | ||| | |||| ||| | ||| | |||||| || ||||||||||||||| Sbjct 30483 TCCCGATCCCCAGGTCGTG--GAGGACGTTATCGTGGAGGCTGTCGCCATTGAGAAGGAG 30540 Query 46396 TTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACG-CACAGTCAATGTGCGA 46454 || || || | || || || |||||| || |||||||| | ||| | |||||| | Sbjct 30541 TTCTTGACTGATGCTCTTCCTTGTGCCCTCCTCGGCATGAATGCCACCCT-GATGTGCCA 30599 Query 46455 CTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCA 46514 |||||||| || || || ||||| || | || ||| | | |||| | || || Sbjct 30600 GTACATCGAATTCGTTGCCGACCGTCTTTTGGTCGCCCTTGGCAACAAGAAGTACTTCCA 30659 Query 46515 CGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTT 46574 || ||| ||||| || || ||| ||||||||||||||| || || || || || || Sbjct 30660 GGCCACCAACCCATTCGACTTCATGGACAACATCTCCCTGGCTGGTAAGACCAACTTCTT 30719 Query 46575 CGAAAAGCGCGTCGGCGAGTA 46595 ||| ||||| || || || || Sbjct 30720 CGAGAAGCGTGTTGGTGACTA 30740 >seq2204 Length=165236 Score = 125 bits (138), Expect = 7e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| |||||| ||||| |||||||| || ||| ||| Sbjct 76836 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 76777 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||||||| ||||| || || ||||| ||| || ||||| | | Sbjct 76776 TCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 76717 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||| | ||||| ||||| ||| ||||| || || || || |||| Sbjct 76716 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 76657 Query 131225 AA 131226 || Sbjct 76656 AA 76655 >seq340 Length=15397 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || |||| || | || |||||||| || || || |||||| Sbjct 14731 CCACCACGCAGACGAAGGACTAGGTGAAGAGTGGACTCCTTCTGGATATTATAATCGGAT 14672 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||| || || ||| |||| | |||||||||||| |||||| Sbjct 14671 AGAGTACGGCCATCCTCAAGCTGTTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGG 14612 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || ||| || ||| | | || | ||||||| | || || | Sbjct 14611 ATTCCTTCCTTATCCTGGATCTTGCTCTTAACATTATCGATAGTATCGCTCGATTCCACC 14552 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| ||| | ||| || || || || || ||||||| Sbjct 14551 TCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTTACGA 14515 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || |||||||| |||||||| |||||| Sbjct 14426 CCACCACGGAGACGAAGAACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCGGAG 14367 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || || ||||| || ||| |||| |||||||||||||| |||||| Sbjct 14366 AGGGTACGGCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 14307 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || ||| ||||||||| Sbjct 14306 ATGCCCTCCTTGTCCTGGATCTTGCTCTTAACATTGTCGATGGTGTCGCTGGACTCGACC 14247 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | || | ||| || ||||| Sbjct 14246 TCCAAAGTGATGGTCTTGCCGGT 14224 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || || || | || ||||| || || |||||||| || | Sbjct 14959 CCTCCACGTAGACGAAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAC 14900 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || ||| | || | ||| || |||||||||||| Sbjct 14899 AAGGTACGACCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCCGGAGGG 14840 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || || | | || | ||||||| || || | Sbjct 14839 ATTCCCTCCTTGTCTTGGATCTTAGATTTCACATTGTCAATTGTATCGGATGATTCAACC 14780 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||||| || || || ||||| || || |||||||| Sbjct 14779 TCGAGCGTGATCGTTTTTCCAGTGAGTGTTTTGACAAAGATCTGCAT 14733 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || |||| ||||| ||| |||||| |||||||||||||| Sbjct 15187 CCTCCACGAAGACGGAGGACTAGATGTAAGGTGCTCTCCTTCTGAATGTTGTAATCAGAG 15128 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || || |||| | ||||||||| || || || Sbjct 15127 AGCGTGCGTCCATCCTCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCTGGTGGA 15068 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||||||| ||| | | || | || || | | ||| | Sbjct 15067 ATACCCTCCTTATCTTGGATTTTCGACTTCACGTTATCAATTGTGTCTGAGCTCTCAACT 15008 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| || || || || ||||||||||| Sbjct 15007 TCCAATGTGATAGTCTTGCCGGTGAGCGTCTTAACAAAAATCTGCAT 14961 >seq932 Length=59417 Score = 98.7 bits (108), Expect = 9e-16 Identities = 233/350 (67%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| ||||| || || | ||||| || | || | ||| || ||| |||| Sbjct 36204 TTGACGACCTGGAACTCACCCGCAAGAACACGGCGTGAGTAGATGTTCGAGGTGTAGGGC 36263 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||||||||| || || |||| || |||||| |||||| Sbjct 36264 TCGAAGCACTCGTTGAAGCCCAGGATCTGGCTAGTGCTTGCAGTTGGCATGGGGGCCACC 36323 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || || ||||||| ||| || || | |||| || | |||||||||| Sbjct 36324 AACAAGCTGTTGCGCACACCGGTCTGAGCAATCTTCGCCTTGAGGGAGTCCCAATCCCAG 36383 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || ||||| | |||||||||||| || || | |||||||| | | | ||| | Sbjct 36384 AGATCGGTCGGGGTTCGGTCCCACATGTCATATTGAAGAATGCCCTGGGAGACAGGGGAG 36443 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 |||| | | || ||| | ||||| || ||||| || || | || || || Sbjct 36444 CCTTCATACGACGAATAA--GGCCCAAATTGCTTGGCCAGATCAGACGAAGCAGTCAAAG 36501 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCA 145405 | ||| ||| || |||||| ||||| |||| ||| || |||| ||| Sbjct 36502 CTCCGTGATAGATGGTCTCGAAGATTTGGATGTTCAGCTGCTTCGCCTCA 36551 >seq1309 Length=113461 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||| |||||||| || |||||||| || Sbjct 106943 CCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAA 106884 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 106883 AGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGG 106824 Query 131128 ATTCCTTCTTTGTC 131141 ||||| || ||||| Sbjct 106823 ATTCCCTCCTTGTC 106810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471997294379520