Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1950 132 1e-25 seq843 105 1e-17 >seq1950 Length=31834 Score = 132 bits (146), Expect = 1e-25 Identities = 274/405 (68%), Gaps = 12/405 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || |||| ||||| |||||||||||||| ||||| ||| Sbjct 30722 TCGAAGAAGTTGGTCTTACCAGCCAGGGAGATGTTGTCCATGAAGTCGAATGGGTTGGTG 30663 Query 251623 GCAT---TGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679 || | ||||| |||| | |||||| || || || | ||||| || || || || Sbjct 30662 GCCTGGAAGTACTTCTTG---TTGCCAAGGGCGACCAAAAGACGGTCGGCAACGAATTCG 30606 Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739 | ||||| | |||||| | |||||||| | | |||||||| || ||| Sbjct 30605 ATGTACTGGCACATCAGGGTGGCATTCATGCCGAGGAGGGCACAAGGAAGAGCATCAGTC 30546 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTC---ACCTGTGCCAGA 251796 | ||| ||||| || |||| || |||||| | | || ||| | ||||| | || Sbjct 30545 AAGAACTCCTTCTCAATGGCGACAGCCTCCACGATAACGTCCTCCACGACCTGGG---GA 30489 Query 251797 GACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCG 251856 | ||||| ||| | ||| | || || |||| | ||| |||||||| Sbjct 30488 TCGGGACGGTTCTTCAGATGAGAGAATAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCA 30429 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||| | |||||| || | || |||||||||| ||||| ||| | ||| Sbjct 30428 TCACGAGAGATAAGCTCGTTAGAGAAGGTGAGACCAGGCATCAAGCCACGCTTCTTCAGC 30369 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||||||| | | ||| ||||||||||| | | |||||||||| Sbjct 30368 CAGAAGATGGAGGCAAAAGATCCAGAGAAGAAGATACCCTCGACA 30324 >seq843 Length=20618 Score = 105 bits (116), Expect = 1e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| |||||| || || || |||| ||||| |||| ||| Sbjct 17513 GGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATCTTGCTGAAC 17454 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | || | | ||||||||| | || || |||||| | |||||||| || | Sbjct 17453 CAGACTCATCTTCGCTTGAAGCGTGGCCAGCGTTACGGTCTCCTTGGTCCCAACGGTACC 17394 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| |||||| ||||| || || || | ||||| ||||| || || || Sbjct 17393 GGTAAGACCACTCTCATGCGTGCTATCAATAATGAGCAGCTTGAAGGTTTCCCCAAGAAG 17334 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557 ||||| | ||| || ||||| ||||||||| Sbjct 17333 GACGAGGTCAAGACTGTCTATGTCGAGCACGAC 17301 Score = 98.7 bits (108), Expect = 2e-15 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 ||||||| || || |||||||| || || || ||| || || ||||| | | || Sbjct 16108 CTCACTCCCGTATGCGCGGTCTCTCCGGTGGTCAGCGTGTTAAGGTTGTCCTTGCCGCCT 16049 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 ||||| ||||| | |||||||||||||| || ||||||||||||||||| || ||||| Sbjct 16048 GCTCT-TGGCAGCGTCCTCACGTGATCGTCCTTGACGAGCCTACCAACTACCTTGACCGT 15990 Query 280821 GAGAGCCTGGGCGCTCTG 280838 || |||||| |||||| Sbjct 15989 GACTCCCTGGGTGCTCTG 15972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027802191450148