Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1950 190 4e-43 seq932 145 1e-29 >seq1950 Length=31834 Score = 190 bits (210), Expect = 4e-43 Identities = 355/516 (69%), Gaps = 9/516 (2%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 |||||||| | |||||||| |||||||| ||| |||||| || | || | || Sbjct 30235 CCCTGCATTAGAAAGAAGGCCGACTGGGCTATCAGGTGGATCCAGGATAAGGAATCGACC 30294 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 ||||| || | || || || || |||| |||||||| ||||||||||| || | || Sbjct 30295 TTCGGTCAGCGTCTCGTGGCGTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGATCTTTT 30354 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAA 42812 ||||||||||||||||| ||| || | | |||||| || ||||||||||| ||||| Sbjct 30355 GCCTCCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACCTTCTCTAACGAG 30414 Query 42813 CTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCAC 42872 || ||| | || ||||| || || | |||||||| || || || ||||| || Sbjct 30415 CTTATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGTCTGCTATTCTC---TCAT 30471 Query 42873 CTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATC 42932 || | | || ||| || || || | | ||| |||||| || | || Sbjct 30472 CTGAAGAACCGTCCCGATCCCCAGGTCGTGGAGGACGTTATCGTGGAGGCTGTCGCCATT 30531 Query 42933 GAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAA--CCACGAC 42989 |||||||||||| | || | | || || ||| |||| |||||||||| |||| | Sbjct 30532 GAGAAGGAGTTCTTGACTGATGCTCTTCCTTGTG-CCCTCCTCGGCATGAATGCCAC--C 30588 Query 42990 CTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC 43049 || |||||| |||||||| | | ||| ||||||| ||| || | | || || Sbjct 30589 CTGATGTGCCAGTACATCGAATTCGTTGCCGACCGTCTTTTGGTCGCCCTTGGCAACAAG 30648 Query 43050 CGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAG 43109 || | | | | ||| |||||||| ||||| |||||||| ||| || ||| Sbjct 30649 AAGTACTTCCAGGCCACCAACCCATTCGACTTCATGGACAACATCTCCCTGGCTGGTAAG 30708 Query 43110 ACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||| ||||||||||| || | ||||||||| Sbjct 30709 ACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 30744 >seq932 Length=59417 Score = 145 bits (160), Expect = 1e-29 Identities = 318/466 (68%), Gaps = 14/466 (3%) Strand=Plus/Plus Query 244979 AGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCC 245038 ||| |||| |||||| | ||| |||||||| |||||| || || ||| ||||||| || Sbjct 37125 AGAGTCCATTCGCCGTTGGCCTCGACCCTCTTCATGAACAGATCTGGGGTCCAGAGAGCA 37184 Query 245039 TGGAAGAGGTCCCTGGTCCTCTGC--TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAA 245096 | ||||||||| | || ||||| || ||| || |||||||| || ||||| | Sbjct 37185 TAGAAGAGGTCAC--GTGCTCTGACTTCTTCCTTACCGTGGTTCTTCCGGAGATCCAAGA 37242 Query 245097 AGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGT 245156 | || ||||| || |||||| ||||| | ||| | || | || || || ||||||| Sbjct 37243 ACTCGAAGACATCAGAGTGCCAAGGCTCTAAGTAAATGGCAAAAGCACCTGGACGCTTGT 37302 Query 245157 TGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAGGCACTAT 245214 |||||||||| || | ||| ||| | || | |||||| | || || | || || || Sbjct 37303 TGCCTCCCTGATCTA-CAT-ATCTGGCAGTGTTGTTGAACACCCGAAGCATGGGAACGAT 37360 Query 245215 GCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCC-CTTGCCC--CTGAGGTTGCT 245271 ||||||||| |||||||| || ||||||| || | || | || ||| Sbjct 37361 ACCGTTAGAGGAACCGTTGGTACCGCCAATGTAGGAACCAGTAGCACGAATGCGGTGAAC 37420 Query 245272 GATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTC 245331 | || | ||| | ||| || || ||| || || | || || |||| | ||||| Sbjct 37421 GTTG---AGGCCGATTCCACCAGCAGTCTTAGAAATCAACGCACACGTCTTAAGTGTGTC 37477 Query 245332 TGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGG 245391 || || || || || ||| |||||||| || || ||||| || | ||||| || Sbjct 37478 ATAGATACCTTCGATACTATCCTCCTTCATGTCGACAAGGAAGCAAGAAGCGAGCTGAGG 37537 Query 245392 CTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 || || ||| | |||||||| |||||| ||| || |||||| Sbjct 37538 CTGAGGAGTGCCGGCGTTGAACAAAGTGGGAGAGGCATGTGTAAAG 37583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944308178457280