Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq340 152 1e-31 seq2204 107 5e-18 >seq340 Length=15397 Score = 152 bits (168), Expect = 1e-31 Identities = 166/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || |||| ||| || || ||||||||||| |||| Sbjct 14731 CCACCACGCAGACGAAGGACTAGGTGAAGAGTGGACTCCTTCTGGATATTATAATCGGAT 14672 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||||| || ||||||||||||||||| || | ||| Sbjct 14671 AGAGTACGGCCATCCTCAAGCTGTTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGG 14612 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||| ||||||||||| || ||| || || || || |||| |||||||||||| || Sbjct 14611 ATTCCTTCCTTATCCTGGATCTT-GCTCTTAACATTATCGATAGTATCGCTCGATTCCAC 14553 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 ||||| ||||| ||||| || || || ||||| |||| Sbjct 14552 CTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTTACGA 14515 Score = 120 bits (132), Expect = 7e-22 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | || || ||||| | ||||| || || || || || || || | Sbjct 15188 TCCTCCACGAAGACGGAGGACTAGATGTAAGGTGCTCTCCTTCTGAATGTTGTAATCAGA 15129 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 |||||||||||| || || | || || || || ||||| |||||||| ||| ||| Sbjct 15128 GAGCGTGCGTCCATCCTCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCTGGTGG 15069 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || || || ||||| |||||||||| |||||||| || || | || |||| || Sbjct 15068 AATACCCTCCTTATCTTGGATTTTCGACTTCACGTTATCAATTGTGTCTGAGCTC---TC 15012 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| ||||| ||||| || ||||| || || |||||||| Sbjct 15011 AACTTCCAATGTGATAGTCTTGCCGGTGAGCGTCTTAACAAAAATCTGCAT 14961 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | | || || || || || | || ||||| ||||| Sbjct 14923 TCTTTCTGGATGTTGTAGTCAGACAAGGTACGACCATCCTCAAGCTGCTTTCCGGCGAAA 14864 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| ||||| |||||||| || || || ||||| || | |||||| || Sbjct 14863 ATGAGACGTTGTTGGTCCGGAGGGATTCCCTCCTTGTCTTGGATCTTAGATTTCACATTG 14804 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||| ||||| || |||||||||||||| || || || || || ||||| Sbjct 14803 TCAATTGTATCGGATGATTCAACCTCGAGCGTGATCGTTTTTCCAGTGAGTGTTTTGACA 14744 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 14743 AAGATCTGCAT 14733 >seq2204 Length=165236 Score = 107 bits (118), Expect = 5e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || || || ||||||||| Sbjct 76834 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 76775 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||| || ||||| || || || |||||||| || || || || || || Sbjct 76774 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 76715 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || || || ||||||||||| Sbjct 76714 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 76656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179614679561784