Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq340 105 7e-18 seq2204 102 9e-17 >seq340 Length=15397 Score = 105 bits (116), Expect = 7e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | ||| | || | ||| || ||||||||||| ||||| |||||||||| Sbjct 15187 CCTCCACGAAGACGGAGGACTAGATGTAAGGTGCTCTCCTTCTGAATGTTGTAATCAGAG 15128 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||||||||| || || || |||||||| || | ||| Sbjct 15127 AGCGTGCGTCCATCCTCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCTGGTGGA 15068 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | |||||| || |||||| || | | | | ||||| |||| || Sbjct 15067 ATACCCTCCTTATCTTGGATTTTCGACTTCACGTTATCAATTGTGTCTGAGCTC---TCA 15011 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||| || ||||| || |||||||| ||||| || ||||| Sbjct 15010 ACTTCCAATGTGATAGTCTTGCCGGTGAGCGTCTTAACAAAAATCTGCAT 14961 Score = 100 bits (110), Expect = 3e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || ||||| ||||| | ||||| || | || || ||||| ||||||||||| Sbjct 14696 CTCCTTCTGGATATTATAATCGGATAGAGTACGGCCATCCTCAAGCTGTTTACCAGCGAA 14637 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | ||||| ||| ||| || || | | Sbjct 14636 GATCAGACGCTGCTGGTCAGGAGGGATTCCTTCCTTATCCTGGATCTTGCTCTTAACATT 14577 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | || |||||||||||||| |||| |||||||| || || || || |||||||| Sbjct 14576 ATCGATAGTATCGCTCGATTCCACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTTAC 14517 >seq2204 Length=165236 Score = 102 bits (112), Expect = 9e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 76836 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 76777 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 76776 TCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 76717 Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || | Sbjct 76716 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 76657 Query 42199 A 42199 | Sbjct 76656 A 76656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543194955459520