Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq340 98.7 1e-15 >seq340 Length=15397 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||||||| | || || || |||||||||||||| | || ||||| | || Sbjct 15172 AGGACTAGATGTAAGGTGCTCTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGTCCATCC 15113 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || ||| | || || |||||||| || || ||||| || || || ||| Sbjct 15112 TCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCTGGTGGAATACCCTCCTTATCT 15053 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| || || | ||| || | || ||||| | || | ||| Sbjct 15052 TGGATTTTCGACTTCACGTTATCAATTGTGTCTGAGCTCTCAACTTCCAATGTGATAGTC 14993 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | || || || ||||| ||||| Sbjct 14992 TTGCCGGTGAGCGTCTTAACAAAAATCTGCAT 14961 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| ||||| |||| || || || || || || || ||||| | Sbjct 14732 ACCACCACGCAGACGAAGGACTAGGTGAAGAGTGGACTCCTTCTGGATATTATAATCGGA 14673 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || |||||||| || || || | || || ||||||||||| ||||| Sbjct 14672 TAGAGTACGGCCATCCTCAAGCTGTTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGG 14613 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||| || || || || || ||| ||| || | ||||| | | ||||| Sbjct 14612 GATTCCTTCCTTATCCTGGATCTTGCTCTTAACATTATCGATAGTATCGCTCGATTCCAC 14553 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 || | || | |||||| || || | || ||||||| Sbjct 14552 CTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTTACGA 14515 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || |||||||| ||||| | || ||| || | || Sbjct 14412 AAGAACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTACGGCCATC 14353 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||| ||||| || || | || | ||||||||||| ||||| || || || || || Sbjct 14352 TTCAAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTC 14293 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | || || | || || || || | ||| | ||| Sbjct 14292 CTGGATCTTGCTCTTAACATTGTCGATGGTGTCGCTGGACTCGACCTCCAAAGTGATGGT 14233 Query 64411 CTTGCCGGT 64419 ||||||||| Sbjct 14232 CTTGCCGGT 14224 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || ||||| || |||||||| || | | ||| || | || ||||||||| Sbjct 14935 TGAAGTGTAGACTCTTTCTGGATGTTGTAGTCAGACAAGGTACGACCATCCTCAAGCTGC 14876 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 || ||||| ||||||| || || ||||| ||||| ||||| || || ||||| || || Sbjct 14875 TTTCCGGCGAAAATGAGACGTTGTTGGTCCGGAGGGATTCCCTCCTTGTCTTGGATCTT 14817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499628386668320