Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1950 116 4e-21 seq340 111 2e-19 seq2204 93.3 4e-14 >seq1950 Length=31834 Score = 116 bits (128), Expect = 4e-21 Identities = 303/450 (67%), Gaps = 19/450 (4%) Strand=Plus/Plus Query 52396 AGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCA 52455 |||| | ||||| |||||| |||||||| | || || || || |||||| ||| Sbjct 30302 AGCGTCTCGTGGCGTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGATCTTTTGCCTCCA 30361 Query 52456 TCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATAT 52515 |||| | | || | | ||| | ||||| || || || ||| |||||| | || | Sbjct 30362 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACCTTCTCTAACGAGCTTATCT 30421 Query 52516 CGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCG 52575 | || || || || || ||||| |||||||| || ||| ||| | | | | | | Sbjct 30422 CTCGTGATGAGGGTCTCCACACTGACTTTGCTTG--TCTGCTATT---CTCTCAT--CTG 30474 Query 52576 AAAAATTGGATTCGGACAC---GATCCTG-AGCATGTT--CAAGGAGGCGGTGGCTATCG 52629 || || | | | || | | || || || | ||| | |||||| || || || | Sbjct 30475 AAGAACCG--TCCCGATCCCCAGGTCGTGGAGGACGTTATCGTGGAGGCTGTCGCCATTG 30532 Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC- 52688 | |||||||| || || | || || || | || || |||||||| || || | Sbjct 30533 AGAAGGAGTTCTTGACTGATGCTCTTCCTTGTGCCCTCCTCGGCATGAATGC-CACCCTG 30591 Query 52689 ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AA 52747 |||||| |||||||||| || || || || ||||| ||||| || || || | | || Sbjct 30592 ATGTGCCAGTACATCGAATTCGTTGCCGACCGTCTTTTGGTCGCCCTTGG-CAACAAGAA 30650 Query 52748 GTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGAC 52807 ||||||| | || ||| || || || || ||| ||||||| || || | || ||||| Sbjct 30651 GTACTTCCAGGCCACCAACCCATTCGACTTCATGGACAACATCTCCCTGGCTGGTAAGAC 30710 Query 52808 CAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||| ||||||||||| || || || || Sbjct 30711 CAACTTCTTCGAGAAGCGTGTTGGTGACTA 30740 >seq340 Length=15397 Score = 111 bits (122), Expect = 2e-19 Identities = 143/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || ||||||||||| || ||||| ||||| || || || |||| Sbjct 14926 GACTCTTTCTGGATGTTGTAGTCAGACAAGGTACGACCATCCTCAAGCTGCTTTCCGGCG 14867 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || ||||| |||||||||||||| || || || ||||| ||| || ||| | | Sbjct 14866 AAAATGAGACGTTGTTGGTCCGGAGGGATTCCCTCCTTGTCTTGGATCTTAGATTTCACA 14807 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | || |||| || || ||||||| ||| | |||||| ||||| || ||||| Sbjct 14806 TTG-TCAATTGTATCGGATGATTCAACCTCGAGCGTGATCGTTTTTCCAGTGAGTGTTTT 14748 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 14747 GACAAAGATCTGCAT 14733 >seq2204 Length=165236 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 76836 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 76777 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | |||||||| |||||||| || || || || ||||| ||| || || | |||| Sbjct 76776 TCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG- 76718 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||||||| ||||||| || |||| || | || ||||| || || || || || Sbjct 76717 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 76658 Query 138604 AAA 138606 ||| Sbjct 76657 AAA 76655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496246097780160