Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016
-07-29] 2,628 sequences; 39,903,795 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1950 116 4e-21
seq340 111 2e-19
seq2204 93.3 4e-14
>seq1950
Length=31834
Score = 116 bits (128), Expect = 4e-21
Identities = 303/450 (67%), Gaps = 19/450 (4%)
Strand=Plus/Plus
Query 52396 AGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCA 52455
|||| | ||||| |||||| |||||||| | || || || || |||||| |||
Sbjct 30302 AGCGTCTCGTGGCGTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGATCTTTTGCCTCCA 30361
Query 52456 TCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATAT 52515
|||| | | || | | ||| | ||||| || || || ||| |||||| | || |
Sbjct 30362 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACCTTCTCTAACGAGCTTATCT 30421
Query 52516 CGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCG 52575
| || || || || || ||||| |||||||| || ||| ||| | | | | | |
Sbjct 30422 CTCGTGATGAGGGTCTCCACACTGACTTTGCTTG--TCTGCTATT---CTCTCAT--CTG 30474
Query 52576 AAAAATTGGATTCGGACAC---GATCCTG-AGCATGTT--CAAGGAGGCGGTGGCTATCG 52629
|| || | | | || | | || || || | ||| | |||||| || || || |
Sbjct 30475 AAGAACCG--TCCCGATCCCCAGGTCGTGGAGGACGTTATCGTGGAGGCTGTCGCCATTG 30532
Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC- 52688
| |||||||| || || | || || || | || || |||||||| || || |
Sbjct 30533 AGAAGGAGTTCTTGACTGATGCTCTTCCTTGTGCCCTCCTCGGCATGAATGC-CACCCTG 30591
Query 52689 ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AA 52747
|||||| |||||||||| || || || || ||||| ||||| || || || | | ||
Sbjct 30592 ATGTGCCAGTACATCGAATTCGTTGCCGACCGTCTTTTGGTCGCCCTTGG-CAACAAGAA 30650
Query 52748 GTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGAC 52807
||||||| | || ||| || || || || ||| ||||||| || || | || |||||
Sbjct 30651 GTACTTCCAGGCCACCAACCCATTCGACTTCATGGACAACATCTCCCTGGCTGGTAAGAC 30710
Query 52808 CAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|||||| ||||||||||| || || || ||
Sbjct 30711 CAACTTCTTCGAGAAGCGTGTTGGTGACTA 30740
>seq340
Length=15397
Score = 111 bits (122), Expect = 2e-19
Identities = 143/195 (73%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| || || ||||||||||| || ||||| ||||| || || || ||||
Sbjct 14926 GACTCTTTCTGGATGTTGTAGTCAGACAAGGTACGACCATCCTCAAGCTGCTTTCCGGCG 14867
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || ||||| |||||||||||||| || || || ||||| ||| || ||| | |
Sbjct 14866 AAAATGAGACGTTGTTGGTCCGGAGGGATTCCCTCCTTGTCTTGGATCTTAGATTTCACA 14807
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | || |||| || || ||||||| ||| | |||||| ||||| || |||||
Sbjct 14806 TTG-TCAATTGTATCGGATGATTCAACCTCGAGCGTGATCGTTTTTCCAGTGAGTGTTTT 14748
Query 138600 TACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 14747 GACAAAGATCTGCAT 14733
>seq2204
Length=165236
Score = 93.3 bits (102), Expect = 4e-14
Identities = 132/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || ||||| || || ||||| | |||
Sbjct 76836 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 76777
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543
| |||||||| |||||||| || || || || ||||| ||| || || | ||||
Sbjct 76776 TCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG- 76718
Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603
|| | ||||||| ||||||| || |||| || | || ||||| || || || || ||
Sbjct 76717 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 76658
Query 138604 AAA 138606
|||
Sbjct 76657 AAA 76655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496246097780160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |