Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq340 107 2e-18 seq2204 95.1 1e-14 >seq340 Length=15397 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| |||||||| | |||||| ||| || ||||| || ||||| | Sbjct 15152 CTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGTCCATCCTCAAGCTGCTTACCAGCAAA 15093 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||| | ||||||||||| || || || |||||||| || ||||||| ||| | | Sbjct 15092 GATAAGACGCTGCTGATCTGGTGGAATACCCTCCTTATCTTGGATTTTCGACTTCACGTT 15033 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | ||||| | ||||| ||||| | || | || |||||||| || || || || Sbjct 15032 ATCAATTGTGTCTGAGCTCTCAACTTCCAATGTGATAGTCTTGCCGGTGAGCGTCTTAAC 14973 Query 127102 AAAAATCTGCAT 127113 |||||||||||| Sbjct 14972 AAAAATCTGCAT 14961 Score = 100 bits (110), Expect = 3e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || ||||| || |||||| | || || ||| || || || |||||| Sbjct 14396 GTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTACGGCCATCTTCAAGTTGCTTTCCA 14337 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| |||||||| || ||||| ||||||||||||||| ||| || ||| Sbjct 14336 GCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTA 14277 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | | |||| |||||| | |||||| || | || | || |||||||| Sbjct 14276 ACATTGTCGATGGTGTCGCTGGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 14224 >seq2204 Length=165236 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| || |||||| ||||| Sbjct 76834 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 76775 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| || || || ||||||||||||||| ||| || ||||| | ||| Sbjct 76774 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 76715 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | |||||| | ||| || |||| ||| | || || || || || || || || ||| Sbjct 76714 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAAA 76655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475485179798720