Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2204 105 8e-18 seq340 104 3e-17 seq1309 89.7 6e-13 >seq2204 Length=165236 Score = 105 bits (116), Expect = 8e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || || |||||||| || ||||| | Sbjct 76836 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 76777 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||| | || | || |||||||||| |||||| ||||| | Sbjct 76776 TCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 76717 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||||||||| || || || | || ||||| || ||||| || || || || | Sbjct 76716 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 76657 Query 46584 A 46584 | Sbjct 76656 A 76656 >seq340 Length=15397 Score = 104 bits (114), Expect = 3e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||| || ||||||||||| || | || || ||||| || || ||||| Sbjct 14696 CTCCTTCTGGATATTATAATCGGATAGAGTACGGCCATCCTCAAGCTGTTTACCAGCGAA 14637 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | | ||||| ||| |||||| |||| | | Sbjct 14636 GATCAGACGCTGCTGGTCAGGAGGGATTCCTTCCTTATCCTGGATCTTGCTCTTAACATT 14577 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || |||||||||||||| || | |||||||| || || || || || || || Sbjct 14576 ATCGATAGTATCGCTCGATTCCACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTTAC 14517 Score = 100 bits (110), Expect = 3e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || || || ||||| || || || | || || || ||||| || ||||| Sbjct 14391 CTCCTTCTGAATGTTATAATCGGAGAGGGTACGGCCATCTTCAAGTTGCTTTCCAGCGAA 14332 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | || |||||||||| |||||| |||| | | Sbjct 14331 GATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTAACATT 14272 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | |||||||| || || || |||| |||||||| ||||| || Sbjct 14271 GTCGATGGTGTCGCTGGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 14224 >seq1309 Length=113461 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || ||||| || | || |||||||||||||| ||||| Sbjct 106908 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAA 106849 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| ||||||||||| | || | | ||||||||| Sbjct 106848 GATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTC 106810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565219831918560