Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2204 114 1e-20 seq1950 98.7 1e-15 seq340 96.9 3e-15 >seq2204 Length=165236 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || |||||||| || ||||| ||| ||||||| ||| | | ||||| | | Sbjct 76656 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 76715 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || | || |||| ||||| ||||| || ||| | ||||| ||||| || Sbjct 76716 GACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTG 76775 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || ||||| || || | |||||||| | ||||||||||||||| ||| Sbjct 76776 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAAG 76835 Query 38433 G 38433 | Sbjct 76836 G 76836 >seq1950 Length=31834 Score = 98.7 bits (108), Expect = 1e-15 Identities = 336/509 (66%), Gaps = 20/509 (4%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || ||| ||| ||| ||| || || || |||||| Sbjct 30725 TTCTCGAAGAAGTTGGTCTTACCAGCCAGGGAGATGTTGTCCATGAAGTCGAATGGGTTG 30666 Query 132685 G----CTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAA 132740 | ||| | ||| | |||| |||| | || |||| | || | |||||| ||||| Sbjct 30665 GTGGCCTG-GAAGTACTTCTTGTTGCCAA---GGGCGACCAAAAGACGGTCGGCAACGAA 30610 Query 132741 CTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACC-GGCAGCGCT 132798 |||||||| || |||| | | ||| | | | || || || |||| || || || Sbjct 30609 TTCGATGTACTGGCACATCAGGGTGGCATTCATG-CCGAGGAGG-GCACAAGGAAGAGCA 30552 Query 132799 TCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGC 132857 || || | ||| | || ||| |||||||| || || || | ||| ||| | Sbjct 30551 TCAGTCAAGAACTCCTT-CTCAATGGCGACAGCCTCCACGATAACGTCCTCCACGACCTG 30493 Query 132858 CGCGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGC 132916 | | |||| || | | || ||| ||| | || ||||||||||| || | | Sbjct 30492 GG-GATCGGGACGGTTCTTCAGATGAGAGAATAGCAGACAAGCAAAGTCAGTGTGGAGAC 30434 Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| || | || || || ||||| ||| || | || ||||| | ||| || || | Sbjct 30433 CCTCATCACGAGAGATAAGCTCGTTAGAGAAGGTGAGACCAGGCATCAAGCCACGCTTCT 30374 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||| || |||| ||| ||| || || ||||||| |||||||| || ||||| | Sbjct 30373 TCAGCCAGAAGATGGAGGCAAAAGATCCAGAGAAGAAGATACCCTCGACAGCGGCGAACG 30314 Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTC--TTTGCTGGCGATCCAGCGCAGCGCCCATTC 133094 |||| || |||| ||||| || | ||| | | ||| |||||| | | ||||| || Sbjct 30313 CCACGAGACGCTGACCGAAGGTCGATTCCTTATCCTG--GATCCACCTGATAGCCCAGTC 30256 Query 133095 GGCCTTTTCTTTGACGCACGGCATCGTTT 133123 |||||| | | | | ||| || | |||| Sbjct 30255 GGCCTTCTTTCTAATGCAGGGAACTGTTT 30227 >seq340 Length=15397 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| || ||||| ||||| |||| || || | || Sbjct 14733 ATGCAGATCTTTGTCAAAACACTCACTGGAAAAACGATCACGCTCGAGGTTGAATCATCC 14792 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | ||| || |||| ||||| |||||||| || | |||||| Sbjct 14793 GATACAATTGACAATGTGAAATCTAAGATCCAAGACAAGGAGGGAATCCCTCCGGACCAA 14852 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||||| ||| || || ||||| || || | || ||| | ||||||||| Sbjct 14853 CAACGTCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGTCTGACTACAAC 14912 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || || | || || || ||||| || ||| Sbjct 14913 ATCCAGAAAGAGTCTACACTTCACTTGGTCCTTCGT 14948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500156369323520