Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016
-07-29] 2,628 sequences; 39,903,795 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq340 109 4e-19
>seq340
Length=15397
Score = 109 bits (120), Expect = 4e-19
Identities = 155/214 (72%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||||| ||| |||||||| ||||| ||||| || | | | || |||| ||
Sbjct 14941 ACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCAGACAAGGTACGACCATCCTCA 14882
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| |||||||| || || || ||||| ||||| | || | |||||||||||
Sbjct 14881 AGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCCGGAGGGATTCCCTCCTTGTCTTGG 14822
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATT-CACCG---GCCTCAACATCGACGGTTATGGT 34948
||||| ||| || || | || ||| | || | ||||| |||| || || ||
Sbjct 14821 ATCTTAGATTTCAC--AT--TGTCAATTGTATCGGATGATTCAACCTCGAGCGTGATCGT 14766
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|||||| ||||| || || |||||||||||||||
Sbjct 14765 TTTTCCAGTGAGTGTTTTGACAAAGATCTGCATA 14732
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
||||| || ||||||||||| || || || || | ||| |||| || ||||| || ||
Sbjct 15157 GTGCTCTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGTCCATCCTCAAGCTGCTTACCA 15098
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
||||| || || || ||||| ||| | || | |||||||| || || ||| ||
Sbjct 15097 GCAAAGATAAGACGCTGCTGATCTGGTGGAATACCCTCCTTATCTTGGATTTTCGACTTC 15038
Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
||| | || | || | |||||| || | || || || || || ||||| |||
Sbjct 15037 ACGTTATCAATTGTGTCTGAGCTCTCAACTTCCAATGTGATAGTCTTGCCGGTGAGCGTC 14978
Query 34965 TTCACAAAGATCTGCATA 34982
|| ||||| |||||||||
Sbjct 14977 TTAACAAAAATCTGCATA 14960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324623202391584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |