Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq340 109 4e-19 >seq340 Length=15397 Score = 109 bits (120), Expect = 4e-19 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| |||||||| ||||| ||||| || | | | || |||| || Sbjct 14941 ACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCAGACAAGGTACGACCATCCTCA 14882 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| |||||||| || || || ||||| ||||| | || | ||||||||||| Sbjct 14881 AGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCCGGAGGGATTCCCTCCTTGTCTTGG 14822 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATT-CACCG---GCCTCAACATCGACGGTTATGGT 34948 ||||| ||| || || | || ||| | || | ||||| |||| || || || Sbjct 14821 ATCTTAGATTTCAC--AT--TGTCAATTGTATCGGATGATTCAACCTCGAGCGTGATCGT 14766 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||||| ||||| || || ||||||||||||||| Sbjct 14765 TTTTCCAGTGAGTGTTTTGACAAAGATCTGCATA 14732 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||||||||| || || || || | ||| |||| || ||||| || || Sbjct 15157 GTGCTCTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGTCCATCCTCAAGCTGCTTACCA 15098 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 ||||| || || || ||||| ||| | || | |||||||| || || ||| || Sbjct 15097 GCAAAGATAAGACGCTGCTGATCTGGTGGAATACCCTCCTTATCTTGGATTTTCGACTTC 15038 Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 ||| | || | || | |||||| || | || || || || || ||||| ||| Sbjct 15037 ACGTTATCAATTGTGTCTGAGCTCTCAACTTCCAATGTGATAGTCTTGCCGGTGAGCGTC 14978 Query 34965 TTCACAAAGATCTGCATA 34982 || ||||| ||||||||| Sbjct 14977 TTAACAAAAATCTGCATA 14960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324623202391584