Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016
-07-29] 2,628 sequences; 39,903,795 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq932 138 1e-27
seq1950 84.2 2e-11
>seq932
Length=59417
Score = 138 bits (152), Expect = 1e-27
Identities = 401/611 (66%), Gaps = 10/611 (2%)
Strand=Plus/Plus
Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184
||| || ||||| ||||| |||| | || ||||| || |||||||| | | |
Sbjct 37070 CTCGAACTCATCGCCATAAACATCCGCCAAGCCAGGGGCCTCGTTAGGACAGAATAGAGT 37129
Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA-A 48243
||| || | | | || || |||| || | |||||| |||| ||||| ||| |
Sbjct 37130 CCATTCGCCGTTGGCCTCGACCCTCTTCATGAACAGATCTGGGGTCCAGAGAGC-ATAGA 37188
Query 48244 ATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCA 48303
| | || | | ||| | |||||| || || ||| | || || | || || |
Sbjct 37189 AGAGGTCACGTGCTCTGACTTCTTCCTTACCGTGGTTCTTCCGGAGATCCAAGAACTCGA 37248
Query 48304 TTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTC 48363
| ||||| ||||| || ||||| || || || | ||||||| || || || ||||
Sbjct 37249 AGACATCAGAGTGCCAAGGCTCTAAGTAAATGGCAAAAGCACCTGGACGCTTGTTGCCTC 37308
Query 48364 CTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTG 48423
| ||||||| |||||||||||| ||||| | || | | ||| || || ||||| || |
Sbjct 37309 CCTGATCTACATATCTGGCAGTGTTGTTGAACACCCGAAGCATGGGAACGATACCGTTAG 37368
Query 48424 ATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAA--TTGAAAT 48481
| ||| ||||| || ||| || ||| |||| | || || ||| |
Sbjct 37369 AGGAACCGTTGGTACCGCCAATGTAGGAACCAGTAGCACGAATGCGGTGAACGTTG--AG 37426
Query 48482 ACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCC 48541
|| || ||||| || | ||||| || | |||||| ||||| || ||||| || ||
Sbjct 37427 GCCGATTCCACCAGCAGTCTTAGAAATCAACGCACACGTCTTAAGTGTGTCATAGATACC 37486
Query 48542 TTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGT 48601
||| |||||||| || |||| | | || || ||| || | || || ||| |||
Sbjct 37487 TTCGATACTATCCTCCTTCATGTCGACAAGGAAGCAAGAAGCGAGCTGAGGCTGAGGAGT 37546
Query 48602 TCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATA 48661
|| | || || || || ||||| ||||| |||| |||||| || | ||| | |||
Sbjct 37547 GCCGGCGTTGAACAAAGTGGGAGAGGCATGTGTAAAGAATTTCTGGGACATCAAGTGATA 37606
Query 48662 TGTTTCAATAACAGAATCTATATCCCATT--GATGTATACCTATAGATACACGCATTAAC 48719
|| |||||| | || |||| |||| || || || | ||| |||||||| |||
Sbjct 37607 GGTCTCAATAGCCTTCTCGATAT--CATTACCGTGGATTCCAACAGAGACACGCATCAAC 37664
Query 48720 ATATATTGAGG 48730
| | ||||||
Sbjct 37665 AGGTGTTGAGG 37675
>seq1950
Length=31834
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016
|| ||| ||||| ||| || || ||||| || | | || | || ||||| || ||
Sbjct 30459 CAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTAGAGAAGGT 30400
Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076
| ||||||||||| || | || || | |||||| || || ||||| |||||||| ||
Sbjct 30399 GAGACCAGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAAAGATCCAGAGAA 30340
Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATT 19136
||| ||||| || || || || || || || || | | || | | | || ||||
Sbjct 30339 GAAGATACCCTCGACAGCGGCGAACGCCACGAGACGCTGACCGAAGGTCGATTCCTTATC 30280
Query 19137 ATGAATCCATTTCAGTGCCCAATCAGCCTTCTTT 19170
|| ||||| | | ||||| || |||||||||
Sbjct 30279 CTGGATCCACCTGATAGCCCAGTCGGCCTTCTTT 30246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562090334725920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |