Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq932 138 1e-27 seq1950 84.2 2e-11 >seq932 Length=59417 Score = 138 bits (152), Expect = 1e-27 Identities = 401/611 (66%), Gaps = 10/611 (2%) Strand=Plus/Plus Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184 ||| || ||||| ||||| |||| | || ||||| || |||||||| | | | Sbjct 37070 CTCGAACTCATCGCCATAAACATCCGCCAAGCCAGGGGCCTCGTTAGGACAGAATAGAGT 37129 Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA-A 48243 ||| || | | | || || |||| || | |||||| |||| ||||| ||| | Sbjct 37130 CCATTCGCCGTTGGCCTCGACCCTCTTCATGAACAGATCTGGGGTCCAGAGAGC-ATAGA 37188 Query 48244 ATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCA 48303 | | || | | ||| | |||||| || || ||| | || || | || || | Sbjct 37189 AGAGGTCACGTGCTCTGACTTCTTCCTTACCGTGGTTCTTCCGGAGATCCAAGAACTCGA 37248 Query 48304 TTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTC 48363 | ||||| ||||| || ||||| || || || | ||||||| || || || |||| Sbjct 37249 AGACATCAGAGTGCCAAGGCTCTAAGTAAATGGCAAAAGCACCTGGACGCTTGTTGCCTC 37308 Query 48364 CTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTG 48423 | ||||||| |||||||||||| ||||| | || | | ||| || || ||||| || | Sbjct 37309 CCTGATCTACATATCTGGCAGTGTTGTTGAACACCCGAAGCATGGGAACGATACCGTTAG 37368 Query 48424 ATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAA--TTGAAAT 48481 | ||| ||||| || ||| || ||| |||| | || || ||| | Sbjct 37369 AGGAACCGTTGGTACCGCCAATGTAGGAACCAGTAGCACGAATGCGGTGAACGTTG--AG 37426 Query 48482 ACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCC 48541 || || ||||| || | ||||| || | |||||| ||||| || ||||| || || Sbjct 37427 GCCGATTCCACCAGCAGTCTTAGAAATCAACGCACACGTCTTAAGTGTGTCATAGATACC 37486 Query 48542 TTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGT 48601 ||| |||||||| || |||| | | || || ||| || | || || ||| ||| Sbjct 37487 TTCGATACTATCCTCCTTCATGTCGACAAGGAAGCAAGAAGCGAGCTGAGGCTGAGGAGT 37546 Query 48602 TCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATA 48661 || | || || || || ||||| ||||| |||| |||||| || | ||| | ||| Sbjct 37547 GCCGGCGTTGAACAAAGTGGGAGAGGCATGTGTAAAGAATTTCTGGGACATCAAGTGATA 37606 Query 48662 TGTTTCAATAACAGAATCTATATCCCATT--GATGTATACCTATAGATACACGCATTAAC 48719 || |||||| | || |||| |||| || || || | ||| |||||||| ||| Sbjct 37607 GGTCTCAATAGCCTTCTCGATAT--CATTACCGTGGATTCCAACAGAGACACGCATCAAC 37664 Query 48720 ATATATTGAGG 48730 | | |||||| Sbjct 37665 AGGTGTTGAGG 37675 >seq1950 Length=31834 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016 || ||| ||||| ||| || || ||||| || | | || | || ||||| || || Sbjct 30459 CAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTAGAGAAGGT 30400 Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076 | ||||||||||| || | || || | |||||| || || ||||| |||||||| || Sbjct 30399 GAGACCAGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAAAGATCCAGAGAA 30340 Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATT 19136 ||| ||||| || || || || || || || || | | || | | | || |||| Sbjct 30339 GAAGATACCCTCGACAGCGGCGAACGCCACGAGACGCTGACCGAAGGTCGATTCCTTATC 30280 Query 19137 ATGAATCCATTTCAGTGCCCAATCAGCCTTCTTT 19170 || ||||| | | ||||| || ||||||||| Sbjct 30279 CTGGATCCACCTGATAGCCCAGTCGGCCTTCTTT 30246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562090334725920