Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1602 105 5e-17 seq2393 91.5 1e-12 seq340 87.8 1e-11 >seq1602 Length=92390 Score = 105 bits (116), Expect = 5e-17 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || || || || ||||| || ||||| |||||||| ||||| || | || Sbjct 27449 ACTGTTCCCGCCTACTTCAACGACTCCCAGCGTCAGGCTACTAAGGATGCCGGTCAGATC 27390 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| ||||| ||||| ||| | |||| || |||||||||||||| ||||| ||||| Sbjct 27389 GCTGGTCTTAACGTTCTCCGTGTCGTCAACGAGCCTACTGCTGCTGCTCTTGCCTATGGT 27330 Query 550529 CTTGATAA 550536 || || || Sbjct 27329 CTGGAGAA 27322 >seq2393 Length=43782 Score = 91.5 bits (100), Expect = 1e-12 Identities = 254/385 (66%), Gaps = 5/385 (1%) Strand=Plus/Plus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 || || |||||||| |||||||||||||| || | || || ||||| || ||||| | Sbjct 26285 AACCCCGATGAGGCCGTTGCCTATGGTGCTGCCGTCCAGGCTGCTATCCTGTCTGGTGAC 26344 Query 552270 AC-TGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326 || | | || | || || | ||| | ||| | |||||| | ||||| ||||||||| Sbjct 26345 ACTTCCTCCAAGTCCACCAACGAGATTCTGCTTCTCGATGTTGCCCCTCTGTCTCTTGGT 26404 Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386 | || || | ||| ||| |||||||| |||||| | | || || || || || | Sbjct 26405 ATCGAGACCGCTGGCGGTGTTATGACTGCCCTTATCAAGCGTAACACCACCATCCCCACT 26464 Query 552387 AAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || || || || | ||| ||||| || || || || || ||| ||| || || | Sbjct 26465 AAGAAGTC-CGAGACTTTCTCTACCTACTCCGACAACCAGCCTGGTGTACTGATCCAGGT 26523 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 | || || || | || || || || || || || | || | | Sbjct 26524 CTACGAGGGTGAGCGTGCTCGTACCAAGGACAACAACTTGCTCGGCAAGTTCGAGCTCAC 26583 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 || ||||| ||||| || ||||| || || || || || || || |||||| | ||||| Sbjct 26584 TGGCATTCCCCCTGCCCCCCGTGGTGTCCCCCAGATCGAGGTCACCTTCGATCTTGATGC 26643 Query 552566 CAATGGAATTTTGAATGTGACTGCT 552590 ||| || || |||| || ||||| Sbjct 26644 CAACGGTATCATGAACGTATCTGCT 26668 >seq340 Length=15397 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | ||||| ||| ||||| || ||||| |||| | || | Sbjct 14950 AGACGAAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCAGACAAGGTACGA 14891 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| ||||| || |||||||| ||||| || | ||| || || ||||| ||||| || Sbjct 14890 CCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCCGGAGGGATTCCCTCC 14831 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGT 563435 || ||||| || || ||| || ||||||||||| | ||| | | ||||| || Sbjct 14830 TTGTCTTGGATCTTAGATTTCACATTGTCAATTGTATC-GGATGATTCAACCTCGAGCGT 14772 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| ||||| || ||||| || || || |||||| Sbjct 14771 GATCGTTTTTCCAGTGAGTGTTTTGACAAAGATCTGCATA 14732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029157019507720