Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2393 123 2e-22 seq340 114 8e-20 >seq2393 Length=43782 Score = 123 bits (136), Expect = 2e-22 Identities = 364/553 (66%), Gaps = 10/553 (2%) Strand=Plus/Plus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA--G 474392 |||||||| || || || || ||| ||||| | ||| | | ||| | ||| | Sbjct 25220 GGTATTGACTTGGGTACCACCTACTCCTGTGTGGGTGTGTTCCGTGATG--ACCGTATTG 25277 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 |||| |||||||| ||||| ||||| | || || || || | || |||| || || | Sbjct 25278 AAATCATTGCCAACGACCAGGGTAACCGTACTACCCCTTCCTTCGTGGCTTTCACCGATA 25337 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | || | ||| || || ||||| || || | || | ||| || ||| || || Sbjct 25338 CCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTTGCCATGAACCCTCACAACACCG 25397 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | || |||||||| | |||| |||||| ||||| ||| | ||||| ||||||| Sbjct 25398 TCTTCGATGCTAAGCGTCTGATCGGTCGTCGTTTTGCCGATGCTGAGGTCCAGTCTGATA 25457 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACC-AT-ATATAGAAGCAAT 474630 || || ||||| || ||| | | | ||||| || || || || || | | Sbjct 25458 TGAAGCACTGGCCCTTCAAGATCGTCGACAAGGGTGGCAAGCCCATCATCCAGGTTGAGT 25517 Query 474631 ACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAA 474690 || | |||||| || || || | || || || |||| || |||||| | |||| Sbjct 25518 TCAAG--GGTGAAGAGAAGCAGTTCACTCCTGAGGAAGTTTCCTCCATGGTTCTGACCAA 25575 Query 474691 AATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTG 474749 ||| | ||||| ||| | || ||||| || | |||| || || |||| Sbjct 25576 GATGCGTGAGACCGCTGAGGCC-TACCTTGGTGGCACTGTCAACAATGCTGTCATCACTG 25634 Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809 | || || || || || || ||||| ||||| || || || || || || ||||| | Sbjct 25635 TCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCCGGTCTCATTGCCG 25694 Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 |||| || || | ||||| || || || || || || ||||| |||| |||||||||| Sbjct 25695 GTCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCCGCTATTGCCTATGGTCTTG 25754 Query 474870 ATAAGAATTCTGA 474882 | ||||| |||| Sbjct 25755 ACAAGAAGACTGA 25767 >seq340 Length=15397 Score = 114 bits (126), Expect = 8e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || ||||| | || || || || || || ||||||| || || Sbjct 15182 ACGAAGACGGAGGACTAGATGTAAGGTGCTCTCCTTCTGAATGTTGTAATCAGAGAGCGT 15123 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| ||||| ||||| |||||||| |||||||| || ||||| || ||||| || Sbjct 15122 GCGTCCATCCTCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCTGGTGGAATACC 15063 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||| ||||| || || || || ||||| || || | | | | || || ||| Sbjct 15062 CTCCTTATCTTGGATTTTCGACTTCACGTTATCAATTGTGTCTGAGCTCTCAACTTCCAA 15003 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || |||||||| |||||||| ||||| || Sbjct 15002 -TGTGATAGTCTTGCCGGTGAGCGTCTTAACAAAAATCTG 14964 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || | ||||||||| ||||| | || || |||| | || Sbjct 14954 ACGTAGACGAAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCAGACAAGGT 14895 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| ||||| |||||||| || ||||| ||||||||||| || ||||| ||||| Sbjct 14894 ACGACCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCCGGAGGGATTCC 14835 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||||| ||||| ||| ||| ||||| ||||| | || | || || | Sbjct 14834 CTCCTTGTCTTGGATCTTAGATTTCACATTGTCAATTGTATCGGATGATTCAA-CCTCGA 14776 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || ||||| || ||||| || || || || || || Sbjct 14775 GCGTGATCGTTTTTCCAGTGAGTGTTTTGACAAAGATCTG 14736 Score = 95.1 bits (104), Expect = 8e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || || ||||| || || || | ||||||||| | |||||| Sbjct 14726 ACGCAGACGAAGGACTAGGTGAAGAGTGGACTCCTTCTGGATATTATAATCGGATAGAGT 14667 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| ||||| || || ||||| || || ||||| || || |||||||| ||||| Sbjct 14666 ACGGCCATCCTCAAGCTGTTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGGATTCC 14607 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||| || || ||||| || ||| || |||||||| | | || || Sbjct 14606 TTCCTTATCCTGGATCTTGCTCTTAACATTATCGATAGTATCGCTCGATTCCACCTCGAG 14547 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 ||| || || || || ||||| ||||| |||| Sbjct 14546 GGTGATGGTCTTTCCAGTGAGGGTCTTTACGA 14515 Score = 91.5 bits (100), Expect = 1e-12 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || ||||| || || ||| || || || |||||||| | || || Sbjct 14421 ACGGAGACGAAGAACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCGGAGAGGGT 14362 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||||||||||||||| || || | ||| || || |||||||| || || Sbjct 14361 ACGGCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCC 14302 Query 480671 TTCCTTGTCTTGAATCTT 480688 |||||||| || ||||| Sbjct 14301 CTCCTTGTCCTGGATCTT 14284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268066472328944