Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq932 116 4e-21 seq1950 96.9 4e-15 seq1513 86.0 7e-12 >seq932 Length=59417 Score = 116 bits (128), Expect = 4e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | |||||| | || | ||||| |||||||||| || | ||| | ||||||||| Sbjct 36952 TGGTATGCTATTTTGGAAGCTCAGACTGAGACTGGAAACCCTTTCATGTTGTACAAGGAT 36893 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || ||||||| ||||| ||||| ||||| ||||||| || ||||| || || ||| Sbjct 36892 GCCTGTAACAGAAAGAGCAACCAGAAGAACCTGGGAACTATTCGCAGCTCTAACCTCTGC 36833 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 || |||||| | |||||||| | | |||||| ||||||||||| Sbjct 36832 ACTGAAATTGTTGAGTACACTGCTCCGGATGAAGTAGCTGTTTGCAA 36786 >seq1950 Length=31834 Score = 96.9 bits (106), Expect = 4e-15 Identities = 159/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 65003 AAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAG 65061 |||| || || || ||| |||||||| | ||||| || | ||| | | | || | Sbjct 30227 AAACAGTTCCCTGCATTAGAAAGAAGGCCGACTGGGCTATCAGGTGGATCCAGGATAAGG 30286 Query 65062 TCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCC 65121 ||| |||||| |||| || | ||||| || ||| ||||||||||||||||| Sbjct 30287 AATCGA-CCTTCGGTCAGCGTCTCGTGGCGTTCGCCGCTGTCGAGGGTATCTTCTTCTCT 30345 Query 65122 GGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTC 65181 || || || | | || | ||| |||||||||| || | ||||| || || |||| Sbjct 30346 GGATCTTTTGCCTCCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACCTTC 30405 Query 65182 TCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 || || || ||||| || || ||||||||||||||| || ||||| Sbjct 30406 TCTAACGAGCTTATCTCTCGTGATGAGGGTCTCCACACTGACTTTGC 30452 >seq1513 Length=38827 Score = 86.0 bits (94), Expect = 7e-12 Identities = 156/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||| ||||| ||||| || ||| | || |||| || ||||| || ||||| | Sbjct 18328 TGGTGCTAAGATTCCCCGCGGTGCCATCCTGTCGGGACCTCCTGGTACTGGTAAGACTTT 18387 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTG-CTCTGCCGCAA 175393 || ||| || | || |||||||| ||||||||| | || | | || | | Sbjct 18388 ACTTGCCAAGGCAACGGCTGGTGAATCGGGCGTCCCATTCTTT-AGCGTCAGTGGCTCGG 18446 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453 | || || |||||||| ||||||||||| | | || || || || || | | | Sbjct 18447 AGTTCGTTGAGATGTTCGTTGGTGTGGGACCTTCCCGTGTCCGTGACCTTTTCGCCAATG 18506 Query 175454 CCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 ||||| ||||| || ||||| ||||||||||||| |||||||| Sbjct 18507 CCCGCAAAAATACGCCTTGTATCATCTTCATTGATGAAATTGATGC 18552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596550002688640