Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1900 143 3e-28 seq1950 107 2e-17 seq2554 104 3e-16 seq932 91.5 2e-12 >seq1900 Length=11353 Score = 143 bits (158), Expect = 3e-28 Identities = 128/159 (81%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104 ||||||| ||||| || || ||||| |||||| || |||||||| | ||||||||||| Sbjct 158 AGGACAGTATCGGTGGTACCGTGACCTGCGTGATCCGTAACGTGCCCGTAGGCCTCGGCG 217 Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164 |||| ||||| |||||| | |||||| |||||||||||||||||| ||||| || | Sbjct 218 AGCCCTGCTTCGACAAGCTTGAGGCCAAGCTCGCCCACGCCATGCTCAGTATCCCCGCAA 277 Query 19165 CCAAGGGATTCGAGATTGGCAGCGGGTTT-GCGGGTGCG 19202 | ||||||||||| || ||| ||| ||| |||| |||| Sbjct 278 CAAAGGGATTCGAAATCGGCTCCGGCTTTGGCGGCTGCG 316 >seq1950 Length=31834 Score = 107 bits (118), Expect = 2e-17 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||||||||| || | || ||||| Sbjct 30749 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGGGAGATG 30690 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||| | ||| ||||||| | || | ||| ||| | | || || | | Sbjct 30689 TTGTCCATGAAGTCGAATGGGTTGGTGGCCTGGAAGTACTTCTTGTTGCCAAGGGCGACC 30630 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | || |||||||| || || ||||||||||||||||| ||| ||| |||||||||| | Sbjct 30629 AAAAGACGGTCGGCAACGAATTCGATGTACTGGCACATCAGGGTGGCATTCATGCCGAGG 30570 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 || || || || | || ||| ||||| ||||| || |||| ||||| ||||| Sbjct 30569 AGGGCACAAGGAAGAGCATCAGTCAAGAACTCCTTCTCAATGGCGACAGCCTCCACGAT 30511 Score = 93.3 bits (102), Expect = 5e-13 Identities = 139/195 (71%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || ||| ||| | ||||| |||| ||| || ||||| | ||| ||||| Sbjct 30435 ACCCTCATCACGAGAGATAAGCTCGTTAGAGAAGGTGAGACCAGGCATCAAGCCACGCTT 30376 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| ||||||| | ||| || ||||| ||||| |||||||| ||||| || Sbjct 30375 CTTCAGCCAGAAGATGGAGGCAAAAGATCCAGAGAAGAAGATACCCTCGACAGCGGCGAA 30316 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | ||| |||| | ||||| ||| || | | | ||||||| | || ||||| Sbjct 30315 CGCCACGAGACGCTGACCGAAGGT--CGATTCCTTA-TCCTGGATCCACCTGATAGCCCA 30259 Query 869359 GTCGGCCTTTTTCCT 869373 ||||||||| || || Sbjct 30258 GTCGGCCTTCTTTCT 30244 >seq2554 Length=107441 Score = 104 bits (114), Expect = 3e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||||||||| |||||| || |||||| | || |||||| | || || ||| Sbjct 42743 GCTGCCAACTACCTCGATATCAAGGGGCTACTCGATGTCGGCTGCAAGACCGTTGCGAAC 42684 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||| ||||||||||| || |||||||| || ||||| || || ||| || ||| Sbjct 42683 ATGATTAAGGGCAAGTCTCCTGAGGAGATTCGGAAGACTTTCAATATCCAGAACG 42629 >seq932 Length=59417 Score = 91.5 bits (100), Expect = 2e-12 Identities = 175/258 (68%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||| || || || | || |||| ||| || || || |||||||| |||| ||||| || Sbjct 37310 CTGATCTACATATCTGGCAGTGTTGTTGAACACCCGAAGCATGGGAACGATACCGTTAGA 37369 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || | | ||||| || | || || | ||| || | ||| Sbjct 37370 GGAACCGTTGGTACCGCCAATGTAGGAACCAGTAGCACGAATGCGGTGAACGTTGAGGCC 37429 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || || || | ||| || || | ||| ||| || || ||||| ||||| || || Sbjct 37430 GATTCCACCAGCAGTCTTAGAAATCAACGCACACGTCTTAAGTGTGTCATAGATACCTTC 37489 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| || |||||||||| || || ||||| || | | || || || | ||||| Sbjct 37490 GATACTATCCTCCTTCATGTCGACAAGGAAGCAAGAAGCGAGCTGAGGCTGAGGAGTGCC 37549 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 ||||||||| | ||||| Sbjct 37550 GGCGTTGAACAAAGTGGG 37567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106923534013076