Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq340 149 6e-31 >seq340 Length=15397 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || ||||| || |||||||| || ||| | || Sbjct 14733 ATGCAGATCTTTGTCAAAACACTCACTGGAAAAACGATCACGCTCGAGGTTGAATCATCC 14792 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | || ||| |||||||||||||| || ||||| ||||| || ||| Sbjct 14793 GATACAATTGACAATGTGAAATCTAAGATCCAAGACAAGGAGGGAATCCCTCCGGACCAA 14852 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || || ||||| || ||||| |||||| | | | |||| || || ||| Sbjct 14853 CAACGTCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGTCTGACTACAAC 14912 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || || ||||| |||||||| | || | || ||||| Sbjct 14913 ATCCAGAAAGAGTCTACACTTCACTTGGTCCTTCGTCTACGTGGAGG 14959 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || || || | || || || ||| |||||| | || | || || Sbjct 14224 ACCGGCAAGACCATCACTTTGGAGGTCGAGTCCAGCGACACCATCGACAATGTTAAGAGC 14283 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || ||||| || || || ||||||||||| || || || Sbjct 14284 AAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGTTTGATCTTCGCTGGAAAG 14343 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || || ||| | | | | || |||||||||||||| ||||| || || || ||| Sbjct 14344 CAACTTGAAGATGGCCGTACCCTCTCCGATTATAACATTCAGAAGGAGTCTACTCTCCAC 14403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449882820863840