Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1950 116 6e-20 seq2554 100 5e-15 >seq1950 Length=31834 Score = 116 bits (128), Expect = 6e-20 Identities = 175/247 (71%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 ||||| ||||| || || || || ||| |||||| ||||||||||| || | || Sbjct 30755 ACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGG 30696 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG- 794011 ||||| ||||| | ||| ||||||| | | || ||| ||||| | || || Sbjct 30695 GAGATGTTGTCCATGAAGTCGAATGGGTTGGTGGCCTGGAAGTACTTCTTGTTGCCAAGG 30636 Query 794012 -CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 |||| || || |||||||| |||||||| |||||||||||||| |||| ||| |||| Sbjct 30635 GCGACCAAA--AGACGGTCGGCAACGAATTCGATGTACTGGCACATCAGGGTGGCATTCA 30578 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| ||| || || || | || | | ||||| ||||| || |||| |||| Sbjct 30577 TGCCGAGGAGGGCACAAGGAAGAGCATCAGTCAAGAACTCCTTCTCAATGGCGACAGCCT 30518 Query 794131 CGATGAT 794137 | | ||| Sbjct 30517 CCACGAT 30511 >seq2554 Length=107441 Score = 100 bits (110), Expect = 5e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || |||||||||||||| |||||| || |||||| | || ||||||||||| || ||| Sbjct 42743 GCTGCCAACTACCTCGATATCAAGGGGCTACTCGATGTCGGCTGCAAGACCGTTGCGAAC 42684 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | || ||||||||||| || ||||| || || ||||| || || ||| || ||| Sbjct 42683 ATGATTAAGGGCAAGTCTCCTGAGGAGATTCGGAAGACTTTCAATATCCAGAACG 42629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915966847653692