Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016
-07-29] 2,628 sequences; 39,903,795 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1950 140 5e-27
seq932 87.8 3e-11
>seq1950
Length=31834
Score = 140 bits (154), Expect = 5e-27
Identities = 216/303 (71%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||||||||| || || ||||||||||| ||| | || |
Sbjct 29846 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAAGAGATTGATC 29904
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887
|| | || |||| ||||| ||| ||| ||| ||||||||| | |||
Sbjct 29905 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGATGACGAGCGCTACTTC 29960
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| |||||||| || || ||| || ||| ||||||||| || ||||||||||
Sbjct 29961 ATCTCCCACGTCCTTGCTTTCTTT-GCTGCCTCCGATGGCATTGTCAACGAGAACCTGCT 30019
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
| || || | ||||||||| | || || || |||| || || || || |||||
Sbjct 30020 TGAGCGTTTCAGCGGAGAGGTCCAGGTCCCTGAAGCTCGTTGCTTCTATGGTTTTCAGAT 30079
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||| ||||| ||||| || || || ||||| || |||||||
Sbjct 30080 CATGATTGAGAACATCCACTCGGAAACTTACTCTCTTCTAATTGACACTTATATCAAGGA 30139
Query 1456068 CCC 1456070
||
Sbjct 30140 GCC 30142
Score = 109 bits (120), Expect = 8e-18
Identities = 181/256 (71%), Gaps = 4/256 (2%)
Strand=Plus/Plus
Query 1456526 ATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTC 1456585
||||| ||||| |||| || ||||| ||||| | | || | || || || |||
Sbjct 30511 ATCGTGGAGGCTGTCGCCATTGAGAAGGAGTTCTTGACTGATGCTCTTCCTTGTGCCCTC 30570
Query 1456586 ATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGC 1456645
|||||||||| |||||| || |||||||||||||| ||||| || |||||||| ||
Sbjct 30571 CTCGGCATGAATGCCACC-CTGATGTGCCAGTACATCGAATTC-GTTGCCGACCGTCTTT 30628
Query 1456646 TCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAG 1456705
| | || || ||| | ||||| ||| || | | ||||||| ||| | |||||
Sbjct 30629 TGGTCGCCCTTGGCAACA-AGAAGTACTTCCAGGCCACCAACCCATTCGACTTCATGGAC 30687
Query 1456706 TTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCCAAG 1456764
||||| || | || ||||||||||| |||||| || | ||| || ||| |||
Sbjct 30688 AACATCTCCCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAG 30747
Query 1456765 GCCGGCGTCACCGCCA 1456780
|||||||| | ||||
Sbjct 30748 GCCGGCGTTATGGCCA 30763
Score = 93.3 bits (102), Expect = 6e-13
Identities = 117/157 (75%), Gaps = 3/157 (2%)
Strand=Plus/Plus
Query 1456120 AGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCG 1456179
|| || |||||||||||||| || | ||||||| | | | || ||||| ||| |
Sbjct 30244 AGAAAGAAGGCCGACTGGGCTATCAGGTGGATCCAGGA-TAAGGAATCGAC-CTTCGGTC 30301
Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238
|||| ||||| | || ||||| |||||||| ||||| ||||| || ||| | |||
Sbjct 30302 AGCGTCTCGTGGCGTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGATCTTTTGCCTCCA 30361
Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||| ||||| |||||||| ||| | ||||| |||||
Sbjct 30362 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCT 30398
>seq932
Length=59417
Score = 87.8 bits (96), Expect = 3e-11
Identities = 174/258 (67%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
||||| | || || |||||||| || | || ||| | || ||||| || | |||
Sbjct 37567 CCCACTTTGTTCAACGCCGGCACTCCTCAGCCTCAGCTCGCTTCTTGCTTCCTTGTCGAC 37508
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| ||||| || ||||||||||| || ||| ||| ||| | || ||
Sbjct 37507 ATGAAGGAGGATAGTATCGAAGGTATCTATGACACACTTAAGACGTGTGCGTTGATTTCT 37448
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| | || || || ||||| | || ||| | || || | || ||||| |
Sbjct 37447 AAGACTGCTGGTGGAATCGGCCTCAACGTTCACCGCATTCGTGCTACTGGTTCCTACATT 37388
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
| || |||||||| || ||||| | || ||||||||||| || || ||| ||||
Sbjct 37387 GGCGGTACCAACGGTTCCTCTAACGGTATCGTTCCCATGCTTCGGGTGTTCAACAACACT 37328
Query 260165 GCGCGCTACGTCGACCAG 260182
|| | || || || |||
Sbjct 37327 GCCAGATATGTAGATCAG 37310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177557724569736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |