Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1950 140 5e-27 seq932 87.8 3e-11 >seq1950 Length=31834 Score = 140 bits (154), Expect = 5e-27 Identities = 216/303 (71%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| || || ||||||||||| ||| | || | Sbjct 29846 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAAGAGATTGATC 29904 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| ||| ||| ||||||||| | ||| Sbjct 29905 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGATGACGAGCGCTACTTC 29960 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||||||| || || ||| || ||| ||||||||| || |||||||||| Sbjct 29961 ATCTCCCACGTCCTTGCTTTCTTT-GCTGCCTCCGATGGCATTGTCAACGAGAACCTGCT 30019 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | ||||||||| | || || || |||| || || || || ||||| Sbjct 30020 TGAGCGTTTCAGCGGAGAGGTCCAGGTCCCTGAAGCTCGTTGCTTCTATGGTTTTCAGAT 30079 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| ||||| ||||| || || || ||||| || ||||||| Sbjct 30080 CATGATTGAGAACATCCACTCGGAAACTTACTCTCTTCTAATTGACACTTATATCAAGGA 30139 Query 1456068 CCC 1456070 || Sbjct 30140 GCC 30142 Score = 109 bits (120), Expect = 8e-18 Identities = 181/256 (71%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 1456526 ATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTC 1456585 ||||| ||||| |||| || ||||| ||||| | | || | || || || ||| Sbjct 30511 ATCGTGGAGGCTGTCGCCATTGAGAAGGAGTTCTTGACTGATGCTCTTCCTTGTGCCCTC 30570 Query 1456586 ATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGC 1456645 |||||||||| |||||| || |||||||||||||| ||||| || |||||||| || Sbjct 30571 CTCGGCATGAATGCCACC-CTGATGTGCCAGTACATCGAATTC-GTTGCCGACCGTCTTT 30628 Query 1456646 TCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAG 1456705 | | || || ||| | ||||| ||| || | | ||||||| ||| | ||||| Sbjct 30629 TGGTCGCCCTTGGCAACA-AGAAGTACTTCCAGGCCACCAACCCATTCGACTTCATGGAC 30687 Query 1456706 TTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCCAAG 1456764 ||||| || | || ||||||||||| |||||| || | ||| || ||| ||| Sbjct 30688 AACATCTCCCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAG 30747 Query 1456765 GCCGGCGTCACCGCCA 1456780 |||||||| | |||| Sbjct 30748 GCCGGCGTTATGGCCA 30763 Score = 93.3 bits (102), Expect = 6e-13 Identities = 117/157 (75%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 1456120 AGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCG 1456179 || || |||||||||||||| || | ||||||| | | | || ||||| ||| | Sbjct 30244 AGAAAGAAGGCCGACTGGGCTATCAGGTGGATCCAGGA-TAAGGAATCGAC-CTTCGGTC 30301 Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238 |||| ||||| | || ||||| |||||||| ||||| ||||| || ||| | ||| Sbjct 30302 AGCGTCTCGTGGCGTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGATCTTTTGCCTCCA 30361 Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||| ||||| |||||||| ||| | ||||| ||||| Sbjct 30362 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCT 30398 >seq932 Length=59417 Score = 87.8 bits (96), Expect = 3e-11 Identities = 174/258 (67%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 ||||| | || || |||||||| || | || ||| | || ||||| || | ||| Sbjct 37567 CCCACTTTGTTCAACGCCGGCACTCCTCAGCCTCAGCTCGCTTCTTGCTTCCTTGTCGAC 37508 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| ||||| || ||||||||||| || ||| ||| ||| | || || Sbjct 37507 ATGAAGGAGGATAGTATCGAAGGTATCTATGACACACTTAAGACGTGTGCGTTGATTTCT 37448 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || || || ||||| | || ||| | || || | || ||||| | Sbjct 37447 AAGACTGCTGGTGGAATCGGCCTCAACGTTCACCGCATTCGTGCTACTGGTTCCTACATT 37388 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 | || |||||||| || ||||| | || ||||||||||| || || ||| |||| Sbjct 37387 GGCGGTACCAACGGTTCCTCTAACGGTATCGTTCCCATGCTTCGGGTGTTCAACAACACT 37328 Query 260165 GCGCGCTACGTCGACCAG 260182 || | || || || ||| Sbjct 37327 GCCAGATATGTAGATCAG 37310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177557724569736