Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq932 149 9e-31 seq1950 105 9e-18 >seq932 Length=59417 Score = 149 bits (164), Expect = 9e-31 Identities = 414/626 (66%), Gaps = 8/626 (1%) Strand=Plus/Plus Query 69505 GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGA 69564 ||| | |||| ||||| ||||| || ||||||| |||| ||||| || || ||| Sbjct 37061 GTAAAGAGCC--TCGAACTCATCGCCATAAACATCCGCCAAGCCAGGGGCCTCGTTAGGA 37118 Query 69565 CACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAA 69624 || | | | ||| | | | ||| || | ||||| || ||||| || |||| Sbjct 37119 CAGAATAGAGTCCATTCGCCGTTGGCCTCGACCCTCTTCATGAACAGATCTGGGGTCCAG 37178 Query 69625 AGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATC 69683 ||||| ||| ||||| || | | ||| |||||| || || || || ||||| Sbjct 37179 AGAGC-ATAGAAGAGGTCACGTGCTCTGACTTCTTCCTTACCGTGGTTCTTCCGGAGATC 37237 Query 69684 GAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCG 69743 | ||||| | | |||||| ||||| || |||| || || || | | || || || Sbjct 37238 CAAGAACTCGAAGACATCAGAGTGCCAAGGCTCTAAGTAAATGGCAAAAGCACCTGGACG 37297 Query 69744 TTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803 || || ||||||||||||| |||||||||||||| || | || | ||||| |||| Sbjct 37298 CTTGTTGCCTCCCTGATCTACATATCTGGCAGTGTTGTTGAACACCCGAAGCATGGGAAC 37357 Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863 ||||| ||||| ||| || || || ||| || || | || ||||| Sbjct 37358 GATACCGTTAGAGGAACCGTTGGTACCGCCAATGTAGGAACCAGTAGCACGAATGCGGTG 37417 Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGT 69922 || || || ||||| || || | ||||| || | |||| |||| || | ||||| Sbjct 37418 AACGTTGAGGCCGATTCCACCAGCAGTCTTAGAAATCAACGCAC-ACGTCTTAAGTGTGT 37476 Query 69923 CATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGAT 69982 |||| ||||| || || ||||| || |||||| | ||| || || || | ||| Sbjct 37477 CATAGATACCTTCGATACTATCCTCCTTCATGTCGACAAGGAAGCAAGAAGCGAGCTGAG 37536 Query 69983 GATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAA 70042 | || ||| || || || || || || ||||| || || || || |||| | || | Sbjct 37537 GCTGAGGAGTGCCGGCGTTGAACAAAGTGGGAGAGGCATGTGTAAAGAATTTCTGGGACA 37596 Query 70043 GCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACA 70101 || | || || |||||||| || ||||| || | || ||||| | | |||| Sbjct 37597 TCAAGTGATAGGTCTCAATAGCCTTCTCGATATCATTACCG-TGGATTCCAACAGAGACA 37655 Query 70102 CGCATCAACATATGCTGAGGTCGTTC 70127 |||||||||| || ||||| || || Sbjct 37656 CGCATCAACAGGTGTTGAGGACGCTC 37681 >seq1950 Length=31834 Score = 105 bits (116), Expect = 9e-18 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || || |||||| || || |||||||| | | || | |||||||| || ||||| Sbjct 30455 CAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTAGAGAAGGTGAGA 30396 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 |||||||| | |||||||| || ||||| || |||| |||||||||||||| |||||| Sbjct 30395 CCAGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAAAGATCCAGAGAAGAAG 30336 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TGT 39793 || || || || || || || || || || | || ||| | | | || ||| || Sbjct 30335 ATACCCTCGACAGCGGCGAACGCCACGAGACGCTGACCGAAGGTCGATTCCTTATCCTGG 30276 Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTT 39822 |||||| | ||||| || || ||||| Sbjct 30275 ATCCACCTGATAGCCCAGTCGGCCTTCTT 30247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686886235045920