Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1950 82.4 6e-11 >seq1950 Length=31834 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/230 (69%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 44055 AAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAAT 44113 ||||||| || ||| |||| | | || || |||||||| | | ||||| | || Sbjct 30227 AAACAGTTCCCTGC-ATTAGAAAGAAGGCCGACTGGGCTATCAGGTGGATCCAGGATAAG 30285 Query 44114 GATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCA 44170 || || || || | || || || ||||| || | ||| || || || ||||| || Sbjct 30286 GAATCGACCTTCGGTCAGCGTCTCGTGGCGTTCGCCGCTGTCGAGGGTATCTTCTTCTCT 30345 Query 44171 GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTT 44230 ||||| ||||| |||| || ||| | ||||| || || ||||||||||| | || || Sbjct 30346 GGATCTTTTGCCTCCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACCTTC 30405 Query 44231 TCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 || || ||| | || ||||||||| || | || || |||||||| Sbjct 30406 TCTAACGAGCTTATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCTTG 30455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397443269981140