Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq340 143 2e-29 >seq340 Length=15397 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || | ||| | ||||||||||| |||||||| ||||| || Sbjct 15187 CCTCCACGAAGACGGAGGACTAGATGTAAGGTGCTCTCCTTCTGAATGTTGTAATCAGAG 15128 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || ||||| ||||| || | |||||| || || || || Sbjct 15127 AGCGTGCGTCCATCCTCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCTGGTGGA 15068 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | |||||||| ||| ||| ||| | || ||| || |||||||||| |||||| || Sbjct 15067 ATACCCTCCTTATCTTGGAT-TTTCGACTTCACGTTATCAATTGTGTCTGAGCTCTCAAC 15009 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || ||||| | ||| || |||||||||||||| Sbjct 15008 TTCCAATGTGATAGTCTTGCCGGTGAGCGTCTTAACAAAAATCTGCAT 14961 Score = 98.7 bits (108), Expect = 6e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||| |||||||||||||| || || || || | ||||||||||| Sbjct 14402 TGGAGAGTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTACGGCCATCTTCAAGTTGC 14343 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || || || || || |||||||| ||||| || || | ||||||||||| |||||| Sbjct 14342 TTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTT 14284 Score = 91.5 bits (100), Expect = 9e-14 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || || ||| || || ||||| || || || | || || Sbjct 14950 AGACGAAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCAGACAAGGTACGA 14891 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || ||||| || || | ||| ||||||||||| || | ||||||| Sbjct 14890 CCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCCGGAGGGATTCCCTCC 14831 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | ||| || | |||||| || || || || | || Sbjct 14830 TTGTCTTGGATC-TTAGATTTCACATTGTCAATTGTATCGGATGATTCAACCTCGAGCGT 14772 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||||| || || | ||||| ||||| |||||||| Sbjct 14771 GATCGTTTTTCCAGTGAGTGTTTTGACAAAGATCTGCAT 14733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314719519604324