Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq340 176 1e-38 seq2204 118 2e-21 seq1309 107 4e-18 >seq340 Length=15397 Score = 176 bits (194), Expect = 1e-38 Identities = 174/225 (77%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | ||||| | |||||| || |||||||| |||||||| || || | | Sbjct 14957 TCCACGTAGACGAAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCAGACAA 14898 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | ||||| || |||||||| || ||||| || || ||||||||||| ||||| | Sbjct 14897 GGTACGACCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCCGGAGGGAT 14838 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||| |||||||| |||||||| |||||| || || || || || || ||||||||| Sbjct 14837 TCCCTCCTTGTCTTGGATCTTAGATTTCACATTGTCAATTGTATCGGATGATTCAACCTC 14778 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| |||||||| ||||| ||||| || || ||||| | |||||| Sbjct 14777 GAGCGTGATCGTTTTTCCAGTGAGTGTTTTGACAAAGATCTGCAT 14733 Score = 168 bits (186), Expect = 2e-36 Identities = 160/203 (79%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||||||||||||||| || ||||| |||||||| | || || | ||||| Sbjct 14716 AGGACTAGGTGAAGAGTGGACTCCTTCTGGATATTATAATCGGATAGAGTACGGCCATCC 14657 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || |||||||| || || || ||||||||||| | ||||||||| ||| Sbjct 14656 TCAAGCTGTTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGGATTCCTTCCTTATCC 14597 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| || || || ||||| || || ||| ||| |||||||| ||||| Sbjct 14596 TGGATCTTGCTCTTAACATTATCGATAGTATC---GCTCGATTCCACCTCGAGGGTGATG 14540 Query 211080 GTCTTTCCCGTGAGAGTCTTTAC 211102 |||||||| ||||| |||||||| Sbjct 14539 GTCTTTCCAGTGAGGGTCTTTAC 14517 Score = 145 bits (160), Expect = 2e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| ||||| ||||| || || ||||||||||| | ||||| | |||||| Sbjct 14411 AGAACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTACGGCCATCT 14352 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || |||||||| | || || ||||||||||| | || ||||||||| Sbjct 14351 TCAAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 14292 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| | || ||||| | |||||| ||| Sbjct 14291 TGGATCTTGCTCTTAACATTGTCGATGGTGTCGCTGGACTCGACCTCCAAAGTGATGGTC 14232 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 14231 TTGCCGGTGA 14222 >seq2204 Length=165236 Score = 118 bits (130), Expect = 2e-21 Identities = 136/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || |||||||| || |||||||| Sbjct 76834 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 76775 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| || || | || ||||||||||||||||| || || || ||| Sbjct 76774 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 76715 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| ||||| ||||| || || ||||| |||||||| ||||| || Sbjct 76714 ATGGTGTC---GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 76658 Query 211104 AA 211105 || Sbjct 76657 AA 76656 >seq1309 Length=113461 Score = 107 bits (118), Expect = 4e-18 Identities = 99/124 (80%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| |||||||| || |||||||| || || | ||| || | ||||| Sbjct 106928 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCC 106869 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || |||||||| || | ||| ||||||| | Sbjct 106868 TCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGT-C 106810 Query 211023 TGGA 211026 |||| Sbjct 106809 TGGA 106806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159112969903220