Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq340 125 2e-23 seq2204 98.7 2e-15 seq1309 86.0 1e-11 >seq340 Length=15397 Score = 125 bits (138), Expect = 2e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| || || |||| ||| ||||||| | ||| | ||||| Sbjct 14716 AGGACTAGGTGAAGAGTGGACTCCTTCTGGATATTATAATCGGATAGAGTACGGCCATCC 14657 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| || || || ||||| || || || |||||||| || Sbjct 14656 TCAAGCTGTTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGGATTCCTTCCTTATCC 14597 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| || || | |||||| || | ||||| ||| Sbjct 14596 TGGATCTTGCTCTTAACATTATCGATAGTATCGCTCGATTCCACCTCGAGGGTGATGGTC 14537 Query 225682 TTGCCCGTCAAAGTTTTTATGA 225703 || || || | || |||| || Sbjct 14536 TTTCCAGTGAGGGTCTTTACGA 14515 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| || || || ||||| |||| ||||| || | ||| || | ||||| Sbjct 14944 AGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCAGACAAGGTACGACCATCC 14885 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || || ||||||||||| || || || || ||||||||| Sbjct 14884 TCAAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCCGGAGGGATTCCCTCCTTGTCT 14825 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| || || || || || | ||| || || | ||||||||| Sbjct 14824 TGGATCTTAGATTTCACATTGTCAATTGTATCGGATGATTCAACCTCGAGCGTGATCGTT 14765 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || || | ||||| Sbjct 14764 TTTCCAGTGAGTGTTTT 14748 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||||||||| || || || || | || ||||||| | || | |||||| Sbjct 14411 AGAACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTACGGCCATCT 14352 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||||||||| | || || ||||| || || || || |||||||| Sbjct 14351 TCAAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 14292 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || || || || || ||||| ||| Sbjct 14291 TGGATCTTGCTCTTAACATTGTCGATGGTGTCGCTGGACTCGACCTCCAAAGTGATGGTC 14232 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 14231 TTGCCGGT 14224 >seq2204 Length=165236 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| ||||||||||| Sbjct 76834 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 76775 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || || || || |||||||| |||||||| ||| ||| ||| Sbjct 76774 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 76715 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| | || ||||| | || || ||||| ||||| Sbjct 76714 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGT 76671 >seq1309 Length=113461 Score = 86.0 bits (94), Expect = 1e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || ||||| || || |||| ||||| || | | ||| | ||||| Sbjct 106928 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCC 106869 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || || || || ||||||||| Sbjct 106868 TCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCT 106809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192491045983832