Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq340 165 2e-35 seq2204 125 1e-23 seq1309 114 3e-20 seq1950 87.8 4e-12 >seq340 Length=15397 Score = 165 bits (182), Expect = 2e-35 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || |||||||| ||||| || || || |||||||| |||| Sbjct 15187 CCTCCACGAAGACGGAGGACTAGATGTAAGGTGCTCTCCTTCTGAATGTTGTAATCAGAG 15128 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| |||||||| || || || || |||||||| | ||| || || || ||| Sbjct 15127 AGCGTGCGTCCATCCTCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCTGGTGGA 15068 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 ||||||||||| |||||||| || | || ||| |||| || ||||| | |||| || || Sbjct 15067 ATACCCTCCTTATCTTGGATTTTCGACTTCACGTTATCAATTGTGTCTG-AGCTCTCAAC 15009 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||| ||||| || || | |||||||| || |||||||| Sbjct 15008 TTCCAATGTGATAGTCTTGCCGGTGAGCGTCTTAACAAAAATCTGCAT 14961 Score = 149 bits (164), Expect = 1e-30 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||| ||||| || ||||| |||| || | || ||||| |||||||||||||||| Sbjct 14960 ACCTCCACGTAGACGAAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCAGA 14901 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || || |||||||| || || || ||||| || || | |||||||||||| | Sbjct 14900 CAAG-GTACGACCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCCGGAG 14842 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || |||||||||||||||||||| | ||| || | || || || || || | ||| | Sbjct 14841 GGATTCCCTCCTTGTCTTGGATCTTAGATTTCACATTGTCAATTGTATCGGATGATTCAA 14782 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| |||||||| || || || | || || || || |||||||| Sbjct 14781 CCTCGAGCGTGATCGTTTTTCCAGTGAGTGTTTTGACAAAGATCTGCAT 14733 Score = 131 bits (144), Expect = 4e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| || || || | ||| || || ||||| || || || | Sbjct 14732 ACCACCACGCAGACGAAGGACTAGGTGAAGAGTGGACTCCTTCTGGATATTATAATCGGA 14673 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || ||||| || || ||||||| ||| || |||||| || Sbjct 14672 TAGAGTACGGCCATCCTCAAGCTGTTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGG 14613 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || || ||||| || |||||| ||||| || || |||||||||| || | ||| | Sbjct 14612 GATTCCTTCCTTATCCTGGATC-TTGCTCTTAACATTATCGATAGTATCGCTCGATTCCA 14554 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 | ||||| ||||| ||||| || || | ||||| |||| Sbjct 14553 CCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTTACGA 14515 Score = 113 bits (124), Expect = 9e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| || || || | || || || || ||||| || || | Sbjct 14426 CCACCACGGAGACGAAGAACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAATCGGAG 14367 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| || ||||| || || || ||||||||||| || |||||| || Sbjct 14366 AGGGTACGGCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 14307 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||| ||||| || || | ||||| ||||| | ||||| Sbjct 14306 ATGCCCTCCTTGTCCTGGATC-TTGCTCTTAACATTGTCGATGGTGTCGCTGGACTCGAC 14248 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || | |||||| ||||| || || Sbjct 14247 CTCCAAAGTGATGGTCTTGCCGGT 14224 >seq2204 Length=165236 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || || || |||||| Sbjct 76834 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 76775 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || ||||| || || ||||||||||| |||||||| || || || | ||| Sbjct 76774 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 76715 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | || || ||||| || || ||||||||||| | ||||| ||||| Sbjct 76714 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 76656 >seq1309 Length=113461 Score = 114 bits (126), Expect = 3e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||| || || |||||||||||||||| Sbjct 106944 ACCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 106885 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||||||||| || || || || || ||||||| ||| || |||||| || Sbjct 106884 AAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGG 106825 Query 282992 AATACCCTCCTTGTCT 283007 || |||||||||||| Sbjct 106824 GATTCCCTCCTTGTCT 106809 >seq1950 Length=31834 Score = 87.8 bits (96), Expect = 4e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 230178 GTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAAT 230237 || || | ||| ||||||||| | || ||| ||||||| || ||||||||||| Sbjct 30523 GTCGCCATTGAGAAGGAGTTCTTGACTGATGCTCTTCCTTGTGCCCTCCTCGGCATGAAT 30582 Query 230238 GCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGG 230297 || || ||| | || || ||||||||||| || || ||| |||| || || || || Sbjct 30583 GCCACCCTGATGTGCCAGTACATCGAATTCGTTGCCGACCGTCTTTTGGTCGCCCTTGGC 30642 Query 230298 TACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAG 230357 || |||| | | ||| ||||| |||| || ||||| ||| || || Sbjct 30643 AACAAGAAGTACTTCCAGGCCACCAACCCATTCGACTTCATGGACAACATCTCCCTGGCT 30702 Query 230358 GGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 || || || ||||||||||| |||||||| | || || || |||||| Sbjct 30703 GGTAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCC 30750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046703954982712