Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20FRR_203425_20[genbank_20GCA_5F001696595.1_202016 -07-29] 2,628 sequences; 39,903,795 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq340 154 4e-32 seq2204 116 9e-21 >seq340 Length=15397 Score = 154 bits (170), Expect = 4e-32 Identities = 160/206 (78%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| ||||| |||||||||||||| |||||||| ||| || || Sbjct 14736 CAGATCTTTGTCAAAACACTCACTGGAAAAACGATCACGCTCGAGGTTGAATCATCCGAT 14795 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||||| || ||||| || ||||||||||||||||| ||| Sbjct 14796 ACAATTGACAATGTGAAATCTAAGATCCAAGACAAGGAGGGAATCCCTCCGGACCAACAA 14855 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || || || ||||||||||| ||||| || ||||| | || |||| | || || ||| | Sbjct 14856 CGTCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTAC-CTTGTCTGACTACAACAT 14914 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 ||| ||||| || ||||| || |||| Sbjct 14915 CCAGAAAGAGTCTACACTTCA-CTTG 14939 Score = 149 bits (164), Expect = 2e-30 Identities = 155/202 (77%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCA 177987 |||| || || ||||| ||||| || |||||||||||||||||| ||| || || | Sbjct 14515 TCGTAAAGACCCTCACTGGAAAGACCATCACCCTCGAGGTGGAATCGAGC---GATACTA 14571 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 |||| || || || ||||| ||||| || |||||||||||||| |||||||| || | Sbjct 14572 TCGATAATGTTAAGAGCAAGATCCAGGATAAGGAAGGAATCCCTCCTGACCAGCAGCGTC 14631 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 | |||||||| || |||||||| || ||||| | ||||| |||||||||| |||| | Sbjct 14632 TGATCTTCGCTGGTAAACAGCTTGAGGATGGCCGTACTCTATCCGATTATAATATCCAGA 14691 Query 178108 AAGAATCAACACTGCATCTTGT 178129 | || || || || || || || Sbjct 14692 AGGAGTCCACTCTTCACCTAGT 14713 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || ||||| | ||||| || | ||||||||||| || || || Sbjct 14222 TCACCGGCAAGACCATCACTTTGGAGGTCGAGTCCAGCGACACCATCGACAATGTTAAGA 14281 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || |||||||| |||||||| || | |||||||| |||| Sbjct 14282 GCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGTTTGATCTTCGCTGGAA 14341 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | || || |||||||| | || || ||||||||||| | || || || || || || | Sbjct 14342 AGCAACTTGAAGATGGCCGTACCCTCTCCGATTATAACATTCAGAAGGAGTCTACTCTCC 14401 Query 178123 ATCTTGTT 178130 | |||||| Sbjct 14402 ACCTTGTT 14409 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || ||||| || || || ||||| | || || || ||||||||| Sbjct 14964 CAGATTTTTGTTAAGACGCTCACCGGCAAGACTATCACATTGGAAGTTGAGAGCTCAGAC 15023 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || || || || || || || || || || || || ||||| Sbjct 15024 ACAATTGATAACGTGAAGTCGAAAATCCAAGATAAGGAGGGTATTCCACCAGATCAGCAG 15083 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || ||||| || |||||| | || || | ||||| ||| | Sbjct 15084 CGTCTTATCTTTGCTGGTAAGCAGCTTGAGGATGGACGCACGCTCTCTGATTACAACATT 15143 Query 178104 CAAAAAGA 178111 || || || Sbjct 15144 CAGAAGGA 15151 >seq2204 Length=165236 Score = 116 bits (128), Expect = 9e-21 Identities = 141/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || ||||| || || || || |||||||| || || ||| ||||| Sbjct 76655 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 76711 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| || ||||| ||||| |||||||| || || ||||| ||||||||||| || Sbjct 76712 CATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCG 76771 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||| || || ||||| || ||||| | || || ||| || ||| |||| Sbjct 76772 TCTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 76831 Query 178106 AAAAGAATCAA 178116 || | || || Sbjct 76832 GAAGGTATGAA 76842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203690668865832