Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq616 176 5e-39 seq665 104 3e-17 >seq616 Length=132684 Score = 176 bits (194), Expect = 5e-39 Identities = 734/1148 (64%), Gaps = 18/1148 (2%) Strand=Plus/Minus Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764 |||| ||| |||| |||||||| || ||||||| || | | || | || |||||| Sbjct 63568 GCAAGAGAAGCCAAGTTACAAACAGCAACCTCATCAGGAGCACTGTACTCAATGATCTCA 63509 Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824 |||||||| || | ||| || || || || | || || ||||| ||||| || Sbjct 63508 GTGCAAAGGTTGGAGCTGCGGATAGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAG 63449 Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884 |||||||| ||||| ||||| || ||||||| ||| |||| || || | | || | | Sbjct 63448 GCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGCGACTCCAAGACGGCGTAC 63389 Query 53885 CAGACGACACGAGCCTTTATTATAGATTTG--TATCTC--TTTTCTCTTTCGTATAGTGT 53940 |||| | ||||| || | || | | | | ||| |||| || | Sbjct 63388 CAGAGTTTCTGGGCCTTGAT----GGTTCGGCGACCACGGCCTTCCTTTTCATACCGCTC 63333 Query 53941 ATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACA 54000 || | ||||||||| ||||| | |||| | | ||||| || | || || Sbjct 63332 GTAAAGAGCTTCAAACTCCTCTCCGTAGACATCTGCAAGGCCAGGGGCCTCGTTGGGGCA 63273 Query 54001 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 54060 | | | ||| || |||| ||| || || ||||| || ||||| || |||| || Sbjct 63272 GAAAAGGGTCCAGTCACCGTTTGCCTCAACACGCTTCATGAACAGATCGGGGGTCCAGAG 63213 Query 54061 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 54120 ||| || ||||| | | ||| |||||| ||||| ||||| || || | Sbjct 63212 AGCGTAGAACAGATCACGAGCTCTCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCCAA 63153 Query 54121 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTT 54180 ||| | | | ||||| |||||||| |||| ||| || | | | ||||| || || Sbjct 63152 GAATTCAAAGACATCAGCGTGCCACGGCTCCAGGTAGATAGCGAAGGCACCAGGGCGCTT 63093 Query 54181 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 54240 |||||| ||||| || | ||||||||| ||||| || | || | | ||| |||| || Sbjct 63092 GTTTCCACCCTGGTCAACGTATCTAGCTGTGTTGTTGAACACACGAAGCATGGGAACGAT 63033 Query 54241 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT 54300 || || || | ||||| || || ||| || || |||| ||||| || Sbjct 63032 GCCGTTAGACGATCCATTCGTACCACCGATGTATGAGCCTGTGGCCCGAATGCGGTGAAC 62973 Query 54301 TGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 54360 ||||| || || || || | |||||||| | || ||| || | || || || Sbjct 62972 GTTCAGACCGATACCACCAGCAGTCTTAGAGATCATCGCACATGTCTTCAGTGTGTCGTA 62913 Query 54361 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 54420 || || || || || || ||| |||||| || | || ||| || || || | | Sbjct 62912 AATACCGTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGAAGCCAGCTGAGGCTG 62853 Query 54421 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 54480 | ||| || || ||||| | || |||||||| || || || | || | || | || Sbjct 62852 AGGAGTACCAGCGTTAAACAGAGTCGGAGAAGCATGTGTGAAGTACTTCTGGGACATCAG 62793 Query 54481 ATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 54540 ||||| |||||||| || || ||||| |||||||| || || |||||||| Sbjct 62792 GTTGTAGGTCTCGATTGCCCTCTCAATATCGTTACCGTGAATTCCAACAGCAACACGCAT 62733 Query 54541 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTC 54600 | || ||||||||| | ||| | | ||| | | ||||| || ||| ||| Sbjct 62732 CAGCAAGTGCTGAGGACGTTCGGCAACCTTTCCATCGAGCCGCAGCAGATATGATCGTTC 62673 Query 54601 CAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAG 54658 | || || ||||| || ||||||| ||||| || || ||||| | || | ||| Sbjct 62672 AAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACGATGGCAGAG 62615 Query 54659 TTGAGTTTATCCTTATATTTGTTAACTACATCC--ATGGTAATACTTGAAATAATCGGAG 54716 ||||| | || || ||| | | || | | ||| | | |||| || || || | Sbjct 62614 TTGAGCTCGTCGGCATGTTTCATTA-TAGTTTCGTATGTTTCT-TTTGATATCATAGGCG 62557 Query 54717 AATGTTTC-CCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAAT 54775 || | | |||||| || || ||||| | | | | ||| || || ||| Sbjct 62556 -CTGATACTTTATTTTTCGGGTTCACATAATGATAGAGATCTGAAATGACGAGGGAGAAT 62498 Query 54776 AGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAA 54835 ||||||| |||| |||||| || || || || || || | || || || ||||||||| Sbjct 62497 TGTTTTTTGGTTTGTTTGTGGAGGTTGGAGACAGCAATACGGGCAGCGAGGATGGCATAA 62438 Query 54836 TCCGGATG 54843 || || || Sbjct 62437 TCGGGGTG 62430 >seq665 Length=165048 Score = 104 bits (114), Expect = 3e-17 Identities = 152/213 (71%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190 ||| || || || ||| ||| ||||||||||| | || | ||||| || ||||| Sbjct 63472 CAAGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAACGT 63531 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250 ||| |||||||| | ||||||||| || |||||||| || || ||||| || || || || Sbjct 63532 GAGACCGGGCATCAAGCCACGCTTCTTCAGCCAAAAGATAGAGGCAAACGAGCCGGAGAA 63591 Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAACCGGCGCTG-TC 24307 ||| || || || || || ||||| |||| || | || | || ||| || Sbjct 63592 GAAGATACCCTCAACGGCAGCAAATGCAACCAGACGTTGGGCGAATGTAGATTCCTGATC 63651 Query 24308 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 24340 || |||||||| |||||| ||||||||||| Sbjct 63652 CTGGATCCACTTAATAGCCCAGTCGGCCTTCTT 63684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593714505026880