Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq358 91.5 2e-13 >seq358 Length=57982 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || || || || || || | ||| | ||| | | Sbjct 54968 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATTACGCTGGAGGTAGAATCCTCT 54909 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || |||| | || ||| ||||| || || || ||||| || || ||||| Sbjct 54908 GATACGATCGATAATGTGAAGACGAAGATTCAGGACAAGGAGGGTATTCCTCCGGATCAG 54849 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || ||||| || ||||| ||| | || ||| | || || | ||||| || Sbjct 54848 CAACGTCTCATTTTCGCCGGAAAGCAACTCGAAGATGGCCGTACCCTGTCTGATTACAAC 54789 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||||||||| ||| | || | || | ||| | || |||||||| Sbjct 54788 ATCCAAAAAGAATCCACTCTTCACCTCGTCCTCCGTCTCCGTGGTGGTAT 54739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755446972300800