Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq358 111 2e-19 seq225 96.9 4e-15 seq803 89.7 6e-13 >seq358 Length=57982 Score = 111 bits (122), Expect = 2e-19 Identities = 157/214 (73%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||||||||||| || || ||||| |||| || || ||| | || || Sbjct 54532 ACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGCCCATCCTCC 54591 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||| ||||||||||| ||||| ||||||||||| | || | | |||||||| | || Sbjct 54592 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGT-CTTG 54650 Query 43095 ATTTTTTGT-TTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149 | | || || |||| ||| | | | ||||| |||| || || || | ||||| | Sbjct 54651 AATCTTCGTCTTGA-CGTTGTCGATTGTGTCGGAGCTC---TCAACTTCCAATGTGATCG 54706 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || |||||||| || ||||| ||||| Sbjct 54707 TCTTCCCAGTGAGCGTCTTAACGAAGATCTGCAT 54740 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| ||||| || | || ||| || | || || ||||||||||||||||| Sbjct 55006 TCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAG 55065 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | ||||||||||| | || | || |||||| ||| ||| || || | | Sbjct 55066 ATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTGGTCTTCACATTG 55125 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||||| || ||||| |||| ||||| || || || || || ||||| ||| Sbjct 55126 TCGATAGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTCACA 55185 Query 43173 A 43173 | Sbjct 55186 A 55186 Score = 95.1 bits (104), Expect = 1e-14 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| || | || || || |||| || |||||||| || || || Sbjct 55305 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGCTGCTTTCCCGCAAA 55364 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||||| || | || ||||||||| ||| || |||| ||| Sbjct 55365 AATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGT 55423 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | |||||||| || || || || | |||||||| |||||||| Sbjct 55424 TGTCAATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGT 55472 >seq225 Length=456365 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || |||||| || | || || |||||||| || ||||| | Sbjct 291658 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 291599 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | | |||||||||| ||| || |||| ||| | Sbjct 291598 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 291540 Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 291539 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 291480 Query 43173 AA 43174 || Sbjct 291479 AA 291478 >seq803 Length=243990 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || ||||| || | ||||| || |||| || ||||||||||| Sbjct 207341 GTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTACCC 207282 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 ||||| || || ||||||||||||| || | | ||||||||| Sbjct 207281 GCGAAGATCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTC 207238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571810766779680