Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq358 107 1e-18 seq803 93.3 3e-14 seq225 89.7 3e-13 >seq358 Length=57982 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| |||||| || |||||||| || ||||| |||| | || Sbjct 54757 AGGACGAGGTGAAGAGTGGATTCTTTTTGGATGTTGTAATCAGACAGGGTACGGCCATCT 54816 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||| || ||||||||||| || ||||| || || | | ||||||||| Sbjct 54817 TCGAGTTGCTTTCCGGCGAAAATGAGACGTTGCTGATCCGGAGGAATACCCTCCTTGTCC 54876 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | |||| ||| | ||||| || |||| ||| ||||| Sbjct 54877 TGAATCTTCGTCTTCACATTATCGATCGTATCAGAGGATTCTACCTCCAGCGTAATGGTC 54936 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || |||||||| || || || |||||||| Sbjct 54937 TTTCCAGTGAGAGTCTTGACGAAAATCTGCAT 54968 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||| ||| | || || || ||||| ||||||||||| || Sbjct 54514 CCACCGCGGAGACGGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCAGAG 54573 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || |||| ||| || || ||||| ||||| ||||||||||| || Sbjct 54574 AGCGTACGCCCATCCTCCAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGG 54633 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | |||| || || Sbjct 54634 ATACCCTCCTTGTCTTGAATCTTCGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCAACT 54693 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || || || ||||| || || || ||||||||||| Sbjct 54694 TCCAATGTGATCGTCTTCCCAGTGAGCGTCTTAACGAAGATCTGCAT 54740 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || ||||| | || || ||||| | || || ||||| |||||||||||||| Sbjct 55269 TCCACCACGCAGACGGAGAACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 55328 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| |||| || | |||||| || || ||||| || |||||||||||| || Sbjct 55329 GAGGGTGCGGCCGTCTTCAAGCTGCTTTCCCGCAAAAATCAGGCGCTGCTGGTCGGGAGG 55388 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | | | | || | ||| | || ||||| Sbjct 55389 AATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATGGTGTCGCTGGACTCGAC 55448 Query 34342 GTCCACCGTGATGGTTTTGCCGGT 34365 || | |||||||| ||||| || Sbjct 55449 CTCAAGAGTGATGGTCTTGCCCGT 55472 Score = 89.7 bits (98), Expect = 3e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | ||| ||| ||||| |||||||||||||||| ||| | || Sbjct 54985 AGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCC 55044 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| || | ||||||||||| || | || |||||| || Sbjct 55045 TCGAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 55104 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | ||| | || || || || | ||||| || Sbjct 55105 TGGATCTTGGTCTTCACATTGTCGATAGTGTCGCTAGACTCCACCTCGAGGGTGATAGTC 55164 Query 34358 TTGCCGGTGAGAGTTTTCACAA 34379 || || ||||| || ||||||| Sbjct 55165 TTACCAGTGAGGGTCTTCACAA 55186 >seq803 Length=243990 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | ||| || ||||| | || || || ||||| ||||||||||| || Sbjct 207371 CCGCCACGCAGACGCAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 207312 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || ||||| || || |||||||||||| ||| Sbjct 207311 AGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCGGGGGGG 207252 Query 34283 ACGCTCTCCTTGTC 34296 | | ||||||||| Sbjct 207251 ATACCCTCCTTGTC 207238 >seq225 Length=456365 Score = 89.7 bits (98), Expect = 3e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||| ||| |||| | || || | ||||||||| ||||| || Sbjct 291656 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 291597 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || ||||||||||| ||| | | ||||||||| ||||| ||| | | | | Sbjct 291596 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 291537 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | ||| |||| |||||||| | || ||||| || || || || || || || || Sbjct 291536 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 291478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323068235807360