Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq616 181 1e-40 seq665 127 3e-24 >seq616 Length=132684 Score = 181 bits (200), Expect = 1e-40 Identities = 625/968 (65%), Gaps = 14/968 (1%) Strand=Plus/Minus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| ||| |||| ||||| || || ||||||| || | | || | || |||||| Sbjct 63568 GCAAGAGAAGCCAAGTTACAAACAGCAACCTCATCAGGAGCACTGTACTCAATGATCTCA 63509 Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 |||||||| || | |||||| || || || | || || ||||| ||||| || Sbjct 63508 GTGCAAAGGTTGGAGCTGCGGATAGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAG 63449 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 |||||||| ||||| ||||| || ||||||| ||| |||| || || | | || | | Sbjct 63448 GCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGCGACTCCAAGACGGCGTAC 63389 Query 63123 CAGACGACTC-GAGCCTTTATTATAGATTTG--TATCTC--CTTTCTCTTTCGTATAGAG 63177 |||| | || | ||||| || | || | | | | | ||| |||| || | Sbjct 63388 CAGA-GTTTCTGGGCCTTGAT----GGTTCGGCGACCACGGCCTTCCTTTTCATACCGCT 63334 Query 63178 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGAC 63237 || | ||| ||||| ||||| | |||| | | | ||| || | || | Sbjct 63333 CGTAAAGAGCTTCAAACTCCTCTCCGTAGACATCTGCAAGGCCAGGGGCCTCGTTGGGGC 63274 Query 63238 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63297 | | | | ||| || |||| ||| || || ||||| || ||||| || |||| | Sbjct 63273 AGAAAAGGGTCCAGTCACCGTTTGCCTCAACACGCTTCATGAACAGATCGGGGGTCCAGA 63214 Query 63298 GAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63357 |||| || ||||| | | ||| |||||| ||||| ||||| || || | Sbjct 63213 GAGCGTAGAACAGATCACGAGCTCTCACTTCCTCCTTTCCGTGGTTCTTGCGGAGGTCCA 63154 Query 63358 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63417 ||| | | | ||||| |||||||| |||| ||| || || | | ||||| || | Sbjct 63153 AGAATTCAAAGACATCAGCGTGCCACGGCTCCAGGTAGATAGCGAAGGCACCAGGGCGCT 63094 Query 63418 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63477 ||||||| ||||| || | ||||||||| ||||| || | || | | ||| |||| | Sbjct 63093 TGTTTCCACCCTGGTCAACGTATCTAGCTGTGTTGTTGAACACACGAAGCATGGGAACGA 63034 Query 63478 TACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAA 63537 | ||||| || ||||| ||||| ||| || || |||| ||||| || Sbjct 63033 TGCCGTTAGACGATCCATTCGTACCACCGATGTATGAGCCTGTGGCCCGAATGCGGTGAA 62974 Query 63538 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCAT 63597 ||||| || || || || | |||||||| | || ||| || | ||||| | Sbjct 62973 CGTTCAGACCGATACCACCAGCAGTCTTAGAGATCATCGCACATGTCTTCAGTGTGTCGT 62914 Query 63598 AGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 63657 | || || || ||||| || || |||||| || | || ||| || || || | Sbjct 62913 AAATACCGTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGAAGCCAGCTGAGGCT 62854 Query 63658 GAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 63717 ||| ||| || || ||||| | || |||||||| || || || | || | || | | Sbjct 62853 GAGGAGTACCAGCGTTAAACAGAGTCGGAGAAGCATGTGTGAAGTACTTCTGGGACATCA 62794 Query 63718 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 63777 | ||||| ||||| || || || ||||| |||||||| || || ||||||| Sbjct 62793 GGTTGTAGGTCTCGATTGCCCTCTCAATATCGTTACCGTGAATTCCAACAGCAACACGCA 62734 Query 63778 TTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63837 | | || ||||||||| | ||| ||| || | | || || || ||| || Sbjct 62733 TCAGCAAGTGCTGAGGACGTTCGGCAACCTTTCCATCGAGCCGCAGCAGATATGATCGTT 62674 Query 63838 CCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGA 63895 | | || || ||||| || ||||||| ||||| || || ||||| | || | || Sbjct 62673 CAAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACGATGGCAGA 62616 Query 63896 ATTGAGCT 63903 ||||||| Sbjct 62615 GTTGAGCT 62608 >seq665 Length=165048 Score = 127 bits (140), Expect = 3e-24 Identities = 390/610 (64%), Gaps = 55/610 (9%) Strand=Plus/Plus Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 ||| || || || ||| ||| ||||||||||| | || | |||||||| ||||| Sbjct 63472 CAAGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAACGT 63531 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 ||| |||||||| | ||||||||| || |||||||| || || || || || ||||| || Sbjct 63532 GAGACCGGGCATCAAGCCACGCTTCTTCAGCCAAAAGATAGAGGCAAACGAGCCGGAGAA 63591 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGCTG-TC 33754 |||||| || || || |||||||| |||| || | | | || ||| || Sbjct 63592 GAAGATACCCTCAACGGCAGCAAATGCAACCAGACGTTGGGCGAATGTAGATTCCTGATC 63651 Query 33755 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTT---------------TTTTACA----- 33794 || |||||||| |||||| ||||||||||| ||||||| Sbjct 63652 CTGGATCCACTTAATAGCCCAGTCGGCCTTCTTGCGAATGCAAGGAACTTTTACATGTCA 63711 Query 33795 -------------CAAGG-------------CA---TCGTTTCTATGGCATTAAAGAGAT 33825 ||||| || | || || ||||||| |||||| | Sbjct 63712 GCGCAGTCAACATCAAGGGCGTATTTGGGAACACACTAGTATCAATGGCATCAAAGAGGT 63771 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 || | | || || || | |||||| || ||||| ||| ||| | || | || Sbjct 63772 AGGTGCGCTGCTTGGGCTCCTTGATATAAGTGTCAATCAAGAGAGAGTACGTCTCGGCAT 63831 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 ||||||| || || ||||| || |||||||| || | ||||||| ||||||||||| Sbjct 63832 GAATGTTCTCGATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGAATCTGCACTT 63891 Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005 || || |||||||| | || || || || || ||||| || ||||| || | Sbjct 63892 CTCCACTGAATCGTTCCAGCAGGTTCTCGTTGACAATGCCATCGGAAGCGGCAAAGAAAG 63951 Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGA 34062 ||| ||| | || || | ||||| || | | || ||||| || | || Sbjct 63952 CCAGAACACGCGAGATGAAGAAGCGCTCGTCATCAGTCAGGCGGTTGTTCCAGTCGTGGA 64011 Query 34063 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 34122 || || || | ||| | ||| || | ||||| || || || || ||||| || |||| Sbjct 64012 GGTCCTTCGAGAGATCGATTTCCTCAGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACA 64071 Query 34123 TATTCCAGAT 34132 | | |||||| Sbjct 64072 TTTGCCAGAT 64081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629810073679680