Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq665 122 1e-22 >seq665 Length=165048 Score = 122 bits (134), Expect = 1e-22 Identities = 391/611 (64%), Gaps = 57/611 (9%) Strand=Plus/Plus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| || || || ||| ||| ||||||||||| | || || ||||| || ||||| Sbjct 63472 CAAGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAACGT 63531 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||| |||||||| | ||||||||| || |||||||| || || ||||| || || || || Sbjct 63532 GAGACCGGGCATCAAGCCACGCTTCTTCAGCCAAAAGATAGAGGCAAACGAGCCGGAGAA 63591 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG--CGCTG-TC 50132 |||||| || || || || ||||| ||||| || | | | | | | ||| || Sbjct 63592 GAAGATACCCTCAACGGCAGCAAATGCAACCAGACGTTGGGCGAATGTAGATTCCTGATC 63651 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTT---------------TTTTACA----- 50172 || |||||||| |||||| ||||||||||| ||||||| Sbjct 63652 CTGGATCCACTTAATAGCCCAGTCGGCCTTCTTGCGAATGCAAGGAACTTTTACATGTCA 63711 Query 50173 -------------CAAGG-------------CA---TCGTTTCTATGGCATTAAAGAGAT 50203 ||||| || | || || ||||||| |||||| | Sbjct 63712 GCGCAGTCAACATCAAGGGCGTATTTGGGAACACACTAGTATCAATGGCATCAAAGAGGT 63771 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 || | | || || || | |||||| || ||||| ||| ||| | || | || Sbjct 63772 AGGTGCGCTGCTTGGGCTCCTTGATATAAGTGTCAATCAAGAGAGAGTACGTCTCGGCAT 63831 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 ||||||| || || ||||| || |||||||| || | ||||||| ||||||||||| Sbjct 63832 GAATGTTCTCGATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGAATCTGCACTT 63891 Query 50324 CTGTACAAAATCGTT-CAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 50382 || || ||||||| |||| | || || || || || || || || ||||| || Sbjct 63892 CTCCACTGAATCGTTCCAGC-AGGTTCTCGTTGACAATGCCATCGGAAGCGGCAAAGAAA 63950 Query 50383 GCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCAATCATTG 50439 |||| ||| | || || |||| || | | || ||||| || | | Sbjct 63951 GCCAGAACACGCGAGATGAAGAAGCGCTCGTCATCAGTCAGGCGGTTGTTCCAGTCGTGG 64010 Query 50440 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 50499 | || || || | ||| | ||| || | ||||| || || || || ||||| || ||| Sbjct 64011 AGGTCCTTCGAGAGATCGATTTCCTCAGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTAC 64070 Query 50500 ATATTCCAGAT 50510 || | |||||| Sbjct 64071 ATTTGCCAGAT 64081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718260216687840