Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq665 107 2e-18 seq358 89.7 5e-13 >seq665 Length=165048 Score = 107 bits (118), Expect = 2e-18 Identities = 336/512 (66%), Gaps = 25/512 (5%) Strand=Plus/Minus Query 50356 CGTAAAAAGGACGATTGGGCATTGAAATGGA-CTaaaaacaaaaaaCTTACTTTGGCCGA 50414 || || |||| ||| ||||| | || |||| | | | || || || || || ||| | Sbjct 63687 CGCAAGAAGGCCGACTGGGCTATTAAGTGGATCCAGGATCAGGAATCT-ACATTCGCCCA 63629 Query 50415 ACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCAT 50474 |||| | || || ||||| ||||| ||| | || || ||||| ||||| | || Sbjct 63628 ACGTCTGGTTGCATTTGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTTGCCTCTAT 63569 Query 50475 ATTTTACATTAA-AACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTT 50533 |||| | || || | | ||| | |||||||| |||||||| |||||| | || | Sbjct 63568 CTTTTGGCTGAAGAAGCGT-GGCTTGATGCCCGGTCTCACGTTCTCTAACGAGCTCATCT 63510 Query 50534 CGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAAT-------ACGCGC 50586 |||| ||||| || | ||||| |||||||| || ||| || | | || || Sbjct 63509 CGCGTGACGAGGGTCTCCACACCGACTTTGCCTGCTTGCTCTTCTCTCACCTGAACTGGC 63450 Query 50587 GTAAATGAAAAATTATCATACGAAACAATTTTGGACATGTTCAAAGAAGCCGTCGACATC 50646 || || || || | ||| |||||| || || || || ||| Sbjct 63449 GTCCATCCAACCAGGTCGT-CGA---------GGACATCATCGTTGAGGCGGTTTCTATC 63400 Query 50647 GAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATG 50706 || || ||||| ||||||| ||| | ||| || | |||| |||||||| || | Sbjct 63399 GAGAAGGAGTTCCTCACGGATGCTCTTCCCTGCGCGCTCCTGGGAATGAACGCCAACCTC 63340 Query 50707 ATGTGCGAGTACATTGAGTTTGTTGCAGACAG-ATTGTTGTTGCAGCTGG-GACAACCGA 50764 ||||| ||||||||||||||||||| ||| | || |||| || ||| |||| || Sbjct 63339 ATGTGTCAGTACATTGAGTTTGTTGCTGACCGCCTTCTTGTCGCTCTTGGTAACAA--GA 63282 Query 50765 AATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAA 50824 | |||| || || ||||||||| || ||| | | ||| || ||| || || | Sbjct 63281 AGTACTTCAACGCCACTAACCCCTTCGACTTCATGGAGACCATCTCTCTGGCTGGTAAGA 63222 Query 50825 CAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856 | ||||| ||||| | ||||| || || ||| Sbjct 63221 CCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 63190 >seq358 Length=57982 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || ||||||||||| ||||||||||| || || | ||||||||||| Sbjct 54766 TGAAGAGTGGATTCTTTTTGGATGTTGTAATCAGACAGGGTACGGCCATCTTCGAGTTGC 54825 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || || || | || |||||||||||||| ||||| || || || ||||| ||| || Sbjct 54826 TTTCCGGCGAAAATGAGACGTTGCTGATCCGGAGGAATACCCTCCTTGTCCTGAATCTTC 54885 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | || | ||| || | || |||||| || | || | ||||| || || Sbjct 54886 GTCTTCACATTATCGATCGTATCAGAGGATTCTACCTCCAGCGTAATGGTCTTTCCAGTG 54945 Query 143162 AATGTTTTTACGAATATTTGCATA 143185 | || || ||||| || |||||| Sbjct 54946 AGAGTCTTGACGAAAATCTGCATA 54969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507008341177920