Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq429 136 3e-27 seq358 93.3 3e-14 >seq429 Length=4788 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||| ||||||||||||||||||||||||||||| || |||||||| Sbjct 2942 AAGCCCGTTCCCTTCGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2883 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2882 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2848 >seq358 Length=57982 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | || | ||||||||| || ||||| || |||||||||| Sbjct 54740 TACCACCACGGAGACGGAGGACGAGGTGAAGAGTGGATTCTTTTTGGATGTTGTAATCAG 54799 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| | || || | ||| |||||||| || || || ||||| ||||| | | Sbjct 54800 ACAGGGTACGGCCATCTTCGAGTTGCTTTCCGGCGAAAATGAGACGTTGCTGATCCGGAG 54859 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || |||||| ||| || ||||||||| | || ||||| ||| | Sbjct 54860 GAATACCCTCCTTGTCCTGAATCTTCGTCTTCACATTATCGATCGTATCAGAGGATTCTA 54919 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | ||||| || || || || | || || ||||| |||||||| Sbjct 54920 CCTCCAGCGTAATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCAT 54968 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146 ||| ||||| | | ||| | ||||| || || ||||||||||| || || ||||| || Sbjct 54510 ATTGCCACCGCGGAGACGGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTC 54569 Query 38147 AGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206 ||| | ||| | || || | ||||| || || || || || || || || || | Sbjct 54570 AGAGAGCGTACGCCCATCCTCCAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGG 54629 Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266 |||| || || ||||| ||| || ||| || || | || || || || || Sbjct 54630 TGGGATACCCTCCTTGTCTTGAATCTTCGTCTTGACGTTGTCGATTGTGTCGGAGCTCTC 54689 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||| ||||| || || || || || | || || ||||| |||||||| Sbjct 54690 AACTTCCAATGTGATCGTCTTCCCAGTGAGCGTCTTAACGAAGATCTGCAT 54740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943297446436