Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq358 100 2e-16 >seq358 Length=57982 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 25003 AAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACA 25062 ||| | |||| ||||| | || ||||| | ||||| |||| |||||||| |||| Sbjct 55192 AAACAGTTGTGAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGCGACA 55133 Query 25063 CTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGC 25122 ||||||| ||||| || ||| || || || || ||||| |||||||| |||| Sbjct 55132 CTATCGACAATGTGAAGACCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGC 55073 Query 25123 GGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTC 25182 | | || || || || || || | || |||| |||||| || ||| ||||| |||| Sbjct 55072 GCTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTTTGTCCGACTACAACATTC 55013 Query 25183 AAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| || || || || ||||| Sbjct 55012 AGAAGGAATCTACCCTTCACTTGGTGCT 54985 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || || || |||| || | || || || || ||| Sbjct 54968 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATTACGCTGGAGGTAGAATCCTCT 54909 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| ||||| | || | ||| ||||| || || ||||| || || || Sbjct 54908 GATACGATCGATAATGTGAAGACGAAGATTCAG-GACAAGGAGGGTATTCCTCCGGATCA 54850 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | ||||| ||||| || ||| | ||||||| || || || |||||||| Sbjct 54849 GCAACGTCTCATTTTCGCCGGAAAGCAACTCGAAGATGGCCGTACCCTGTCTGATTACAA 54790 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || |||||||||||||| || || Sbjct 54789 CATCCAAAAAGAATCCACTCTTCA 54766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433322951187140