Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq665 109 6e-19 >seq665 Length=165048 Score = 109 bits (120), Expect = 6e-19 Identities = 265/398 (67%), Gaps = 24/398 (6%) Strand=Plus/Plus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986 ||||| ||||| || ||||||||| |||| | | |||||||| || || || || Sbjct 63311 TCAGCAACAAACTCAATGTACTGACACATGAGGTTGGCGTTCATTCCCAGGAG-CGCGCA 63369 Query 92987 GGTA-GAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 || | |||| || || | ||| || |||||||| ||| || || | ||| || Sbjct 63370 GGGAAGAGCATCCGTGAGGAACTCCTTCTCGATAGAAACCGCCTCAACGATGATGTC--- 63426 Query 93046 TACTCTACTATTTGGTGGTTTTTGTACGACA-------TAATTGTACATTAAGCACGCAA 93098 ||| || | |||| | | | ||| || | | | | | ||||| |||| Sbjct 63427 --CTCGACGACCTGGTTGGAT--GGACGCCAGTTCAGGTGAGAGAAGAGCAAGCAGGCAA 63482 Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTA 93158 ||||||| || | ||| ||||| || || || | ||| || ||| || | ||| || | Sbjct 63483 AGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAACGTGAGACCGGGCA 63542 Query 93159 ACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTT 93218 || || || ||||| |||||||| || || ||||| || || || || ||||| | Sbjct 63543 TCAAGCCACGCTTCTTCAGCCAAAAGATAGAGGCAAACGAGCCGGAGAAGAAGATACCCT 63602 Query 93219 CCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT----GATC 93274 | ||||| |||||||| || | ||||| ||| || | | ||| ||| | |||| Sbjct 63603 CAACGGCAGCAAATGCAACCAGACGTTGGGCGAATGTAG----ATTCCTGATCCTGGATC 63658 Query 93275 CATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 || || | |||||| ||||| || || ||| ||||| Sbjct 63659 CACTTAATAGCCCAGTCGGCCTTCTTGCGAATGCAAGG 63696 Score = 96.9 bits (106), Expect = 4e-15 Identities = 194/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 || || || || || || ||||| ||| | || | ||| | ||||| || || ||| Sbjct 63795 ATATAAGTGTCAATCAAGAGAGAGTACGTCTCGGCATGAATGTTCTCGATCATGATCTGG 63854 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || |||||||| || | || || | |||||||||||| | |||| || | || Sbjct 63855 AAACCGTAGAAGCAGCGGGCCTCGGGAATCTGCACTTCTCCACTGAATCGTTCCAGCAGG 63914 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || || ||||| || |||||||| || ||||| ||||||| | | || || || Sbjct 63915 TTCTCGTTGACAATGCCATCGGAAGCGGCAAAGAAAGCCAGAACACGCGAGATGAAGAAG 63974 Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||| ||||| | | | || | ||| ||| || || || || ||||||| ||| Sbjct 63975 CGCTCGTCATCAGTCAGGCGGTTGTTCCAGTCGTGGAGGTCCTTCGAGAGATCGATTTCC 64034 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 || | ||||| || || ||||| || || |||||||| | ||| || Sbjct 64035 TCAGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTGCCAGAT 64081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556854145513440